PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

6129
Candidate Protein Records
5262
Pathway-Level Records
12692
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: LAC
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Protein/Isoform Record Pathway Family Confidence Status Best Target
PITA_000088760-RA Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
PITA_000088919-RA Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
PITA_000089413-RA Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
PITA_000089453-RA Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
PITA_000089915-RA Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
PITA_000090051-RA Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
PITA_000090227-RA Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
PITA_000091161-RA Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
PITA_000091315-RA Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
PITA_000092197-RA Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
PITA_000092503-RA Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
PITA_000092607-RA Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
PITA_000092972-RA Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
PITA_000093683-RA Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
PITA_000094174-RA Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
PITA_000094760-RA Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
PITA_000094761-RA Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
PITA_000094791-RA Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
PITA_000095425-RA Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
PITA_000096049-RA Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
PITAhm_000754-RA Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
PITAhm_001380-RA Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
PITAhm_001588-RA Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
PITAhm_001650-RA Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
PITAhm_002190-RA Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
PITAhm_002250-RA Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
PITAhm_003108-RA Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH