PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

5262
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PAL
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Gene Pathway Family Confidence Status
PITA_000047899-RA Phenylpropanoid PAL low borderline
PITA_000049303-RA Phenylpropanoid PAL low borderline
PITA_000056344-RA Phenylpropanoid PAL low borderline
PITA_000057642-RA Phenylpropanoid PAL high pass
PITA_000064080-RA Phenylpropanoid PAL low borderline
PITA_000065366-RA Phenylpropanoid PAL high pass
PITA_000067816-RA Phenylpropanoid PAL low borderline
PITA_000072028-RA Phenylpropanoid PAL low borderline
PITA_000074853-RA Phenylpropanoid PAL high pass
PITA_000074958-RA Phenylpropanoid PAL medium pass
PITA_000075110-RA Phenylpropanoid PAL high pass
PITA_000077002-RA Phenylpropanoid PAL high pass
PITA_000078355-RA Phenylpropanoid PAL high pass
PITA_000079302-RA Phenylpropanoid PAL medium pass
PITA_000079303-RA Phenylpropanoid PAL low borderline
PITA_000079629-RA Phenylpropanoid PAL high pass
PITA_000080150-RA Phenylpropanoid PAL medium pass
PITA_000080473-RA Phenylpropanoid PAL high pass
PITA_000082179-RA Phenylpropanoid PAL high pass
PITA_000086462-RA Phenylpropanoid PAL high pass
PITA_000093606-RA Phenylpropanoid PAL high pass
PITA_000094991-RA Phenylpropanoid PAL medium pass
PITA_000094992-RA Phenylpropanoid PAL high pass
PITA_000095146-RA Phenylpropanoid PAL medium pass
PITA_000095762-RA Phenylpropanoid PAL medium pass
PITA_000096539-RA Phenylpropanoid PAL medium pass
PITA_000096540-RA Phenylpropanoid PAL high pass
PITA_000096541-RA Phenylpropanoid PAL medium pass
5A_I7_VO_L_34327_T_10/19|m.51437.mrna1 Rosmarinic Acid PAL low borderline
PITA_000002303-RA Rosmarinic Acid PAL high pass
PITA_000002304-RA Rosmarinic Acid PAL high pass
PITA_000005593-RA Rosmarinic Acid PAL high pass
PITA_000005594-RA Rosmarinic Acid PAL high pass
PITA_000015525-RA Rosmarinic Acid PAL high pass
PITA_000029467-RA Rosmarinic Acid PAL low borderline
PITA_000029579-RA Rosmarinic Acid PAL medium pass
PITA_000038676-RA Rosmarinic Acid PAL high pass
PITA_000041078-RA Rosmarinic Acid PAL high pass
PITA_000047220-RA Rosmarinic Acid PAL low borderline
PITA_000047899-RA Rosmarinic Acid PAL low borderline
PITA_000049303-RA Rosmarinic Acid PAL low borderline
PITA_000056344-RA Rosmarinic Acid PAL low borderline
PITA_000057642-RA Rosmarinic Acid PAL high pass
PITA_000064080-RA Rosmarinic Acid PAL low borderline
PITA_000065366-RA Rosmarinic Acid PAL high pass
PITA_000067816-RA Rosmarinic Acid PAL low borderline
PITA_000072028-RA Rosmarinic Acid PAL low borderline
PITA_000074853-RA Rosmarinic Acid PAL high pass
PITA_000074958-RA Rosmarinic Acid PAL medium pass
PITA_000075110-RA Rosmarinic Acid PAL high pass