PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

5262
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: RAS
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Gene Pathway Family Confidence Status
PITA_000051190-RA Rosmarinic Acid RAS medium pass
PITA_000051414-RA Rosmarinic Acid RAS low borderline
PITA_000052000-RA Rosmarinic Acid RAS low borderline
PITA_000053768-RA Rosmarinic Acid RAS low borderline
PITA_000054209-RA Rosmarinic Acid RAS medium pass
PITA_000054665-RA Rosmarinic Acid RAS medium pass
PITA_000054908-RA Rosmarinic Acid RAS low borderline
PITA_000054909-RA Rosmarinic Acid RAS low borderline
PITA_000055409-RA Rosmarinic Acid RAS medium pass
PITA_000058513-RA Rosmarinic Acid RAS low borderline
PITA_000059153-RA Rosmarinic Acid RAS medium pass
PITA_000060600-RA Rosmarinic Acid RAS medium pass
PITA_000061450-RA Rosmarinic Acid RAS low borderline
PITA_000062528-RA Rosmarinic Acid RAS medium pass
PITA_000067390-RA Rosmarinic Acid RAS low borderline
PITA_000068478-RA Rosmarinic Acid RAS medium pass
PITA_000070434-RA Rosmarinic Acid RAS low borderline
PITA_000073986-RA Rosmarinic Acid RAS medium pass
PITA_000078904-RA Rosmarinic Acid RAS medium pass
PITA_000079984-RA Rosmarinic Acid RAS medium pass
PITA_000081575-RA Rosmarinic Acid RAS medium pass
PITA_000083577-RA Rosmarinic Acid RAS medium pass
PITA_000083698-RA Rosmarinic Acid RAS low borderline
PITA_000083918-RA Rosmarinic Acid RAS low borderline
PITA_000084527-RA Rosmarinic Acid RAS medium pass
PITA_000085197-RA Rosmarinic Acid RAS low borderline
PITA_000085583-RA Rosmarinic Acid RAS medium pass
PITA_000086068-RA Rosmarinic Acid RAS medium pass
PITA_000086385-RA Rosmarinic Acid RAS low borderline
PITA_000089332-RA Rosmarinic Acid RAS medium pass
PITA_000092363-RA Rosmarinic Acid RAS medium pass
PITA_000093883-RA Rosmarinic Acid RAS medium pass
PITA_000094193-RA Rosmarinic Acid RAS low borderline
PITA_000094359-RA Rosmarinic Acid RAS medium pass
PITAhm_001928-RA Rosmarinic Acid RAS medium pass