PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

5262
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: SGD
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Gene Pathway Family Confidence Status
PITA_000041270-RA Alkaloid SGD medium pass
PITA_000042337-RA Alkaloid SGD medium pass
PITA_000042661-RA Alkaloid SGD medium pass
PITA_000043711-RA Alkaloid SGD low borderline
PITA_000044750-RA Alkaloid SGD medium pass
PITA_000044751-RA Alkaloid SGD medium pass
PITA_000045781-RA Alkaloid SGD medium pass
PITA_000047308-RA Alkaloid SGD medium pass
PITA_000047310-RA Alkaloid SGD low borderline
PITA_000047875-RA Alkaloid SGD medium pass
PITA_000049963-RA Alkaloid SGD medium pass
PITA_000050055-RA Alkaloid SGD medium pass
PITA_000051350-RA Alkaloid SGD medium pass
PITA_000053831-RA Alkaloid SGD low borderline
PITA_000054563-RA Alkaloid SGD medium pass
PITA_000054826-RA Alkaloid SGD medium pass
PITA_000055425-RA Alkaloid SGD medium pass
PITA_000056376-RA Alkaloid SGD medium pass
PITA_000056461-RA Alkaloid SGD low borderline
PITA_000056463-RA Alkaloid SGD low borderline
PITA_000056691-RA Alkaloid SGD medium pass
PITA_000056962-RA Alkaloid SGD medium pass
PITA_000057275-RA Alkaloid SGD low borderline
PITA_000057930-RA Alkaloid SGD low borderline
PITA_000057955-RA Alkaloid SGD low borderline
PITA_000059567-RA Alkaloid SGD medium pass
PITA_000061307-RA Alkaloid SGD low borderline
PITA_000063768-RA Alkaloid SGD medium pass
PITA_000064075-RA Alkaloid SGD medium pass
PITA_000064483-RA Alkaloid SGD medium pass
PITA_000065343-RA Alkaloid SGD medium pass
PITA_000067968-RA Alkaloid SGD low borderline
PITA_000069165-RA Alkaloid SGD medium pass
PITA_000070125-RA Alkaloid SGD medium pass
PITA_000070582-RA Alkaloid SGD low borderline
PITA_000070953-RA Alkaloid SGD medium pass
PITA_000072735-RA Alkaloid SGD medium pass
PITA_000073053-RA Alkaloid SGD low borderline
PITA_000073502-RA Alkaloid SGD low borderline
PITA_000073503-RA Alkaloid SGD medium pass
PITA_000073937-RA Alkaloid SGD medium pass
PITA_000074111-RA Alkaloid SGD medium pass
PITA_000074261-RA Alkaloid SGD medium pass
PITA_000075332-RA Alkaloid SGD low borderline
PITA_000075901-RA Alkaloid SGD medium pass
PITA_000076245-RA Alkaloid SGD medium pass
PITA_000076560-RA Alkaloid SGD medium pass
PITA_000076912-RA Alkaloid SGD medium pass
PITA_000077771-RA Alkaloid SGD low borderline
PITA_000077925-RA Alkaloid SGD low borderline