PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

5262
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: SMT1/SMT2/SMT3
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Gene Pathway Family Confidence Status
PITA_000001058-RA Steroid SMT1/SMT2/SMT3 medium pass
PITA_000005133-RA Steroid SMT1/SMT2/SMT3 low borderline
PITA_000006671-RA Steroid SMT1/SMT2/SMT3 low borderline
PITA_000008207-RA Steroid SMT1/SMT2/SMT3 low borderline
PITA_000008521-RA Steroid SMT1/SMT2/SMT3 low borderline
PITA_000009051-RA Steroid SMT1/SMT2/SMT3 medium pass
PITA_000009052-RA Steroid SMT1/SMT2/SMT3 medium pass
PITA_000009373-RA Steroid SMT1/SMT2/SMT3 medium pass
PITA_000012484-RA Steroid SMT1/SMT2/SMT3 low borderline
PITA_000013315-RA Steroid SMT1/SMT2/SMT3 medium pass
PITA_000015693-RA Steroid SMT1/SMT2/SMT3 medium pass
PITA_000017795-RA Steroid SMT1/SMT2/SMT3 medium pass
PITA_000018316-RA Steroid SMT1/SMT2/SMT3 low borderline
PITA_000018870-RA Steroid SMT1/SMT2/SMT3 low borderline
PITA_000019193-RA Steroid SMT1/SMT2/SMT3 medium pass
PITA_000021017-RA Steroid SMT1/SMT2/SMT3 medium pass
PITA_000021021-RA Steroid SMT1/SMT2/SMT3 low borderline
PITA_000021024-RA Steroid SMT1/SMT2/SMT3 low borderline
PITA_000021027-RA Steroid SMT1/SMT2/SMT3 low borderline
PITA_000021818-RA Steroid SMT1/SMT2/SMT3 low borderline
PITA_000022085-RA Steroid SMT1/SMT2/SMT3 low borderline
PITA_000024038-RA Steroid SMT1/SMT2/SMT3 medium pass
PITA_000024442-RA Steroid SMT1/SMT2/SMT3 medium pass
PITA_000024445-RA Steroid SMT1/SMT2/SMT3 medium pass
PITA_000025212-RA Steroid SMT1/SMT2/SMT3 medium pass
PITA_000025346-RA Steroid SMT1/SMT2/SMT3 low borderline
PITA_000026773-RA Steroid SMT1/SMT2/SMT3 low borderline
PITA_000028233-RA Steroid SMT1/SMT2/SMT3 low borderline
PITA_000029040-RA Steroid SMT1/SMT2/SMT3 low borderline
PITA_000029306-RA Steroid SMT1/SMT2/SMT3 medium pass
PITA_000030389-RA Steroid SMT1/SMT2/SMT3 medium pass
PITA_000032141-RA Steroid SMT1/SMT2/SMT3 medium pass
PITA_000032510-RA Steroid SMT1/SMT2/SMT3 medium pass
PITA_000032765-RA Steroid SMT1/SMT2/SMT3 medium pass
PITA_000034489-RA Steroid SMT1/SMT2/SMT3 low borderline
PITA_000036779-RA Steroid SMT1/SMT2/SMT3 low borderline
PITA_000038915-RA Steroid SMT1/SMT2/SMT3 medium pass
PITA_000039955-RA Steroid SMT1/SMT2/SMT3 medium pass
PITA_000041599-RA Steroid SMT1/SMT2/SMT3 medium pass
PITA_000041637-RA Steroid SMT1/SMT2/SMT3 low borderline
PITA_000043408-RA Steroid SMT1/SMT2/SMT3 medium pass
PITA_000045103-RA Steroid SMT1/SMT2/SMT3 low borderline
PITA_000045401-RA Steroid SMT1/SMT2/SMT3 medium pass
PITA_000046769-RA Steroid SMT1/SMT2/SMT3 low borderline
PITA_000046916-RA Steroid SMT1/SMT2/SMT3 low borderline
PITA_000047128-RA Steroid SMT1/SMT2/SMT3 medium pass
PITA_000050887-RA Steroid SMT1/SMT2/SMT3 medium pass
PITA_000052950-RA Steroid SMT1/SMT2/SMT3 low borderline
PITA_000055435-RA Steroid SMT1/SMT2/SMT3 low borderline
PITA_000055751-RA Steroid SMT1/SMT2/SMT3 low borderline