PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

5262
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: SMT1/SMT2/SMT3
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Gene Pathway Family Confidence Status Best Target
PITA_000055759-RA Steroid SMT1/SMT2/SMT3 medium pass SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
PITA_000056452-RA Steroid SMT1/SMT2/SMT3 medium pass SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
PITA_000057066-RA Steroid SMT1/SMT2/SMT3 low borderline SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
PITA_000058004-RA Steroid SMT1/SMT2/SMT3 low borderline SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
PITA_000058230-RA Steroid SMT1/SMT2/SMT3 medium pass SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
PITA_000058307-RA Steroid SMT1/SMT2/SMT3 medium pass SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
PITA_000059370-RA Steroid SMT1/SMT2/SMT3 low borderline SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
PITA_000061660-RA Steroid SMT1/SMT2/SMT3 medium pass SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
PITA_000061930-RA Steroid SMT1/SMT2/SMT3 medium pass SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
PITA_000062104-RA Steroid SMT1/SMT2/SMT3 low borderline SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
PITA_000064703-RA Steroid SMT1/SMT2/SMT3 medium pass SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
PITA_000064969-RA Steroid SMT1/SMT2/SMT3 low borderline SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
PITA_000067719-RA Steroid SMT1/SMT2/SMT3 low borderline SMT1_SMT2_SMT3__00006__sp_Q9LM02_SMT1_ARATH
PITA_000067778-RA Steroid SMT1/SMT2/SMT3 low borderline SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
PITA_000069385-RA Steroid SMT1/SMT2/SMT3 low borderline SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
PITA_000070801-RA Steroid SMT1/SMT2/SMT3 medium pass SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
PITA_000071343-RA Steroid SMT1/SMT2/SMT3 low borderline SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
PITA_000072028-RA Steroid SMT1/SMT2/SMT3 medium pass SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
PITA_000072029-RA Steroid SMT1/SMT2/SMT3 medium pass SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
PITA_000074114-RA Steroid SMT1/SMT2/SMT3 medium pass SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
PITA_000077270-RA Steroid SMT1/SMT2/SMT3 medium pass SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
PITA_000077776-RA Steroid SMT1/SMT2/SMT3 low borderline SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
PITA_000078387-RA Steroid SMT1/SMT2/SMT3 medium pass SMT1_SMT2_SMT3__00006__sp_Q9LM02_SMT1_ARATH
PITA_000079071-RA Steroid SMT1/SMT2/SMT3 medium pass SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
PITA_000080615-RA Steroid SMT1/SMT2/SMT3 low borderline SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
PITA_000080973-RA Steroid SMT1/SMT2/SMT3 medium pass SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
PITA_000081310-RA Steroid SMT1/SMT2/SMT3 medium pass SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
PITA_000082066-RA Steroid SMT1/SMT2/SMT3 medium pass SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
PITA_000083951-RA Steroid SMT1/SMT2/SMT3 medium pass SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
PITA_000084581-RA Steroid SMT1/SMT2/SMT3 low borderline SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
PITA_000085124-RA Steroid SMT1/SMT2/SMT3 low borderline SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
PITA_000085135-RA Steroid SMT1/SMT2/SMT3 low borderline SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
PITA_000085179-RA Steroid SMT1/SMT2/SMT3 medium pass SMT1_SMT2_SMT3__00006__sp_Q9LM02_SMT1_ARATH
PITA_000085925-RA Steroid SMT1/SMT2/SMT3 medium pass SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
PITA_000088152-RA Steroid SMT1/SMT2/SMT3 low borderline SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
PITA_000088158-RA Steroid SMT1/SMT2/SMT3 low borderline SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
PITA_000088828-RA Steroid SMT1/SMT2/SMT3 medium pass SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
PITA_000092769-RA Steroid SMT1/SMT2/SMT3 low borderline SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
PITA_000093053-RA Steroid SMT1/SMT2/SMT3 low borderline SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
PITA_000095436-RA Steroid SMT1/SMT2/SMT3 low borderline SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
PITA_000095610-RA Steroid SMT1/SMT2/SMT3 low borderline SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
PITA_000095842-RA Steroid SMT1/SMT2/SMT3 low borderline SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
PITA_000095991-RA Steroid SMT1/SMT2/SMT3 medium pass SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
PITAhm_000070-RA Steroid SMT1/SMT2/SMT3 low borderline SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
PITAhm_001300-RA Steroid SMT1/SMT2/SMT3 medium pass SMT1_SMT2_SMT3__00004__sp_Q4VNK0_SMTA_BRAOT
PITAhm_001833-RA Steroid SMT1/SMT2/SMT3 low borderline SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
PITAhm_002518-RA Steroid SMT1/SMT2/SMT3 medium pass SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
PITAhm_002943-RA Steroid SMT1/SMT2/SMT3 low borderline SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH