PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

6129
Candidate Protein Records
5262
Pathway-Level Records
12692
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T16H
Reset
Protein/Isoform Record Pathway Family Confidence Status
PITA_000088299-RA Alkaloid T16H medium borderline
PITA_000089385-RA Alkaloid T16H low borderline
PITA_000090075-RA Alkaloid T16H medium borderline
PITA_000090431-RA Alkaloid T16H medium borderline
PITA_000090721-RA Alkaloid T16H medium borderline
PITA_000091261-RA Alkaloid T16H medium borderline
PITA_000091869-RA Alkaloid T16H medium borderline
PITA_000091958-RA Alkaloid T16H medium borderline
PITA_000092170-RA Alkaloid T16H medium borderline
PITA_000092718-RA Alkaloid T16H medium borderline
PITA_000092870-RA Alkaloid T16H medium borderline
PITA_000093264-RA Alkaloid T16H medium borderline
PITA_000094027-RA Alkaloid T16H low borderline
PITA_000094184-RA Alkaloid T16H medium pass
PITA_000094185-RA Alkaloid T16H medium borderline
PITA_000094202-RA Alkaloid T16H medium borderline
PITA_000094203-RA Alkaloid T16H medium pass
PITA_000094230-RA Alkaloid T16H medium borderline
PITA_000094261-RA Alkaloid T16H low borderline
PITA_000094439-RA Alkaloid T16H low borderline
PITA_000094531-RA Alkaloid T16H medium pass
PITA_000094695-RA Alkaloid T16H medium borderline
PITA_000094858-RA Alkaloid T16H medium borderline
PITA_000094894-RA Alkaloid T16H medium borderline
PITA_000094905-RA Alkaloid T16H low borderline
PITA_000095071-RA Alkaloid T16H medium borderline
PITA_000095072-RA Alkaloid T16H low borderline
PITA_000095920-RA Alkaloid T16H medium borderline
PITA_000095953-RA Alkaloid T16H low borderline
PITA_000096296-RA Alkaloid T16H low borderline
PITAhm_000578-RA Alkaloid T16H medium borderline
PITAhm_002405-RA Alkaloid T16H low borderline
PITAhm_003161-RA Alkaloid T16H medium borderline