PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

5262
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
PITA_000074643-RA Alkaloid T3O low borderline
PITA_000075006-RA Alkaloid T3O low borderline
PITA_000075585-RA Alkaloid T3O medium borderline
PITA_000075792-RA Alkaloid T3O medium pass
PITA_000076004-RA Alkaloid T3O low borderline
PITA_000076042-RA Alkaloid T3O medium borderline
PITA_000077262-RA Alkaloid T3O medium borderline
PITA_000077279-RA Alkaloid T3O low borderline
PITA_000077799-RA Alkaloid T3O low borderline
PITA_000078717-RA Alkaloid T3O low borderline
PITA_000079350-RA Alkaloid T3O medium pass
PITA_000079570-RA Alkaloid T3O medium pass
PITA_000080255-RA Alkaloid T3O medium borderline
PITA_000080576-RA Alkaloid T3O low borderline
PITA_000081073-RA Alkaloid T3O medium pass
PITA_000081694-RA Alkaloid T3O low borderline
PITA_000081785-RA Alkaloid T3O medium borderline
PITA_000082017-RA Alkaloid T3O low borderline
PITA_000082027-RA Alkaloid T3O low borderline
PITA_000082538-RA Alkaloid T3O low borderline
PITA_000082779-RA Alkaloid T3O low borderline
PITA_000084014-RA Alkaloid T3O low borderline
PITA_000084217-RA Alkaloid T3O medium borderline
PITA_000084733-RA Alkaloid T3O low borderline
PITA_000084850-RA Alkaloid T3O low borderline
PITA_000085580-RA Alkaloid T3O medium borderline
PITA_000086040-RA Alkaloid T3O medium borderline
PITA_000086303-RA Alkaloid T3O medium pass
PITA_000086380-RA Alkaloid T3O medium borderline
PITA_000086429-RA Alkaloid T3O low borderline
PITA_000086811-RA Alkaloid T3O medium pass
PITA_000087768-RA Alkaloid T3O low borderline
PITA_000089892-RA Alkaloid T3O low borderline
PITA_000090633-RA Alkaloid T3O low borderline
PITA_000090756-RA Alkaloid T3O low borderline
PITA_000091203-RA Alkaloid T3O medium borderline
PITA_000091346-RA Alkaloid T3O low borderline
PITA_000091603-RA Alkaloid T3O low borderline
PITA_000091630-RA Alkaloid T3O low borderline
PITA_000091810-RA Alkaloid T3O medium borderline
PITA_000092575-RA Alkaloid T3O low borderline
PITA_000092686-RA Alkaloid T3O medium borderline
PITA_000092983-RA Alkaloid T3O medium borderline
PITA_000093044-RA Alkaloid T3O low borderline
PITA_000093134-RA Alkaloid T3O medium borderline
PITA_000093430-RA Alkaloid T3O medium pass
PITA_000094099-RA Alkaloid T3O medium pass
PITA_000094335-RA Alkaloid T3O low borderline
PITA_000094495-RA Alkaloid T3O medium borderline
PITA_000095135-RA Alkaloid T3O low borderline