PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

5262
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TPS
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Gene Pathway Family Confidence Status Best Target
PITA_000018643-RA Terpenoid TPS medium pass TPS__00101__sp_F2XF99_FARNS_PICXS
PITA_000018694-RA Terpenoid TPS medium pass TPS__00183__sp_R9QMW2_RAPN1_PINCO
PITA_000018774-RA Terpenoid TPS medium pass TPS__00107__sp_F2XFA6_LLOS1_PICSI
PITA_000018808-RA Terpenoid TPS medium pass TPS__00099__sp_F2XF97_AHUMS_PICGL
PITA_000019686-RA Terpenoid TPS medium pass TPS__00099__sp_F2XF97_AHUMS_PICGL
PITA_000019687-RA Terpenoid TPS low borderline TPS__00099__sp_F2XF97_AHUMS_PICGL
PITA_000019690-RA Terpenoid TPS medium pass TPS__00099__sp_F2XF97_AHUMS_PICGL
PITA_000020636-RA Terpenoid TPS medium pass TPS__00099__sp_F2XF97_AHUMS_PICGL
PITA_000020638-RA Terpenoid TPS low borderline TPS__00099__sp_F2XF97_AHUMS_PICGL
PITA_000020640-RA Terpenoid TPS medium pass TPS__00099__sp_F2XF97_AHUMS_PICGL
PITA_000020916-RA Terpenoid TPS medium pass TPS__00099__sp_F2XF97_AHUMS_PICGL
PITA_000020917-RA Terpenoid TPS medium pass TPS__00099__sp_F2XF97_AHUMS_PICGL
PITA_000020970-RA Terpenoid TPS medium pass TPS__00015__sp_A0A1L6Z3A5_TPS5_PSEAD
PITA_000021128-RA Terpenoid TPS medium pass TPS__00142__sp_M4HXW5_MISO1_PINBN
PITA_000021129-RA Terpenoid TPS medium pass TPS__00146__sp_M4HYC8_MPIM1_PINCO
PITA_000021130-RA Terpenoid TPS medium pass TPS__00147__sp_M4HYP3_MISO1_PINCO
PITA_000021153-RA Terpenoid TPS medium pass TPS__00101__sp_F2XF99_FARNS_PICXS
PITA_000022113-RA Terpenoid TPS medium pass TPS__00189__sp_R9QMY8_CAMPS_PINCO
PITA_000022114-RA Terpenoid TPS medium pass TPS__00189__sp_R9QMY8_CAMPS_PINCO
PITA_000022125-RA Terpenoid TPS medium pass TPS__00015__sp_A0A1L6Z3A5_TPS5_PSEAD
PITA_000022126-RA Terpenoid TPS low borderline TPS__00109__sp_F2XFB2_LEVOS_PICSI
PITA_000022127-RA Terpenoid TPS medium pass TPS__00015__sp_A0A1L6Z3A5_TPS5_PSEAD
PITA_000022460-RA Terpenoid TPS medium pass TPS__00015__sp_A0A1L6Z3A5_TPS5_PSEAD
PITA_000022845-RA Terpenoid TPS medium pass TPS__00142__sp_M4HXW5_MISO1_PINBN
PITA_000022926-RA Terpenoid TPS medium pass TPS__00145__sp_M4HYC6_TPSD2_PINCO
PITA_000024010-RA Terpenoid TPS medium pass TPS__00102__sp_F2XFA0_TPSLS_PICXS
PITA_000026247-RA Terpenoid TPS medium pass TPS__00068__sp_C0PPM5_ALGPS_PICSI
PITA_000026248-RA Terpenoid TPS low borderline TPS__00161__sp_Q675L0_TPSLS_PICAB
PITA_000026353-RA Terpenoid TPS medium pass TPS__00099__sp_F2XF97_AHUMS_PICGL
PITA_000027509-RA Terpenoid TPS medium pass TPS__00177__sp_R9QMR1_RAPN1_PINBN
PITA_000027510-RA Terpenoid TPS low borderline TPS__00177__sp_R9QMR1_RAPN1_PINBN
PITA_000027511-RA Terpenoid TPS medium pass TPS__00097__sp_F2XF95_PINS1_PICGL
PITA_000027512-RA Terpenoid TPS medium pass TPS__00177__sp_R9QMR1_RAPN1_PINBN
PITA_000027513-RA Terpenoid TPS low borderline TPS__00189__sp_R9QMY8_CAMPS_PINCO
PITA_000027825-RA Terpenoid TPS medium pass TPS__00145__sp_M4HYC6_TPSD2_PINCO
PITA_000027826-RA Terpenoid TPS medium pass TPS__00094__sp_F2XF92_ISOPS_PICSI
PITA_000028107-RA Terpenoid TPS medium pass TPS__00145__sp_M4HYC6_TPSD2_PINCO
PITA_000028108-RA Terpenoid TPS medium pass TPS__00145__sp_M4HYC6_TPSD2_PINCO
PITA_000028590-RA Terpenoid TPS medium pass TPS__00146__sp_M4HYC8_MPIM1_PINCO
PITA_000028624-RA Terpenoid TPS medium pass TPS__00102__sp_F2XFA0_TPSLS_PICXS
PITA_000028918-RA Terpenoid TPS medium pass TPS__00102__sp_F2XFA0_TPSLS_PICXS
PITA_000029079-RA Terpenoid TPS low borderline TPS__00101__sp_F2XF99_FARNS_PICXS
PITA_000029947-RA Terpenoid TPS low borderline TPS__00177__sp_R9QMR1_RAPN1_PINBN
PITA_000030334-RA Terpenoid TPS medium pass TPS__00099__sp_F2XF97_AHUMS_PICGL
PITA_000030335-RA Terpenoid TPS medium pass TPS__00099__sp_F2XF97_AHUMS_PICGL
PITA_000030336-RA Terpenoid TPS medium pass TPS__00099__sp_F2XF97_AHUMS_PICGL
PITA_000030337-RA Terpenoid TPS low borderline TPS__00068__sp_C0PPM5_ALGPS_PICSI
PITA_000030380-RA Terpenoid TPS medium pass TPS__00100__sp_F2XF98_CINES_PICXS
PITA_000030381-RA Terpenoid TPS medium pass TPS__00100__sp_F2XF98_CINES_PICXS
PITA_000032174-RA Terpenoid TPS medium pass TPS__00177__sp_R9QMR1_RAPN1_PINBN