PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

6129
Candidate Protein Records
5262
Pathway-Level Records
12692
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TPS
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Protein/Isoform Record Pathway Family Confidence Status Best Target
PITA_000061832-RA Terpenoid TPS low borderline TPS__00102__sp_F2XFA0_TPSLS_PICXS
PITA_000062422-RA Terpenoid TPS medium pass TPS__00141__sp_M4HXU6_TPSD1_PINBN
PITA_000062423-RA Terpenoid TPS medium pass TPS__00141__sp_M4HXU6_TPSD1_PINBN
PITA_000062483-RA Terpenoid TPS medium pass TPS__00180__sp_R9QMR5_ATERP_PINBN
PITA_000062484-RA Terpenoid TPS medium pass TPS__00069__sp_C0PPR1_LLOS2_PICSI
PITA_000063085-RA Terpenoid TPS medium pass TPS__00015__sp_A0A1L6Z3A5_TPS5_PSEAD
PITA_000063608-RA Terpenoid TPS medium pass TPS__00145__sp_M4HYC6_TPSD2_PINCO
PITA_000063877-RA Terpenoid TPS medium pass TPS__00015__sp_A0A1L6Z3A5_TPS5_PSEAD
PITA_000063974-RA Terpenoid TPS medium pass TPS__00099__sp_F2XF97_AHUMS_PICGL
PITA_000064134-RA Terpenoid TPS medium pass TPS__00069__sp_C0PPR1_LLOS2_PICSI
PITA_000064135-RA Terpenoid TPS medium pass TPS__00095__sp_F2XF93_LLOS_PICGL
PITA_000064157-RA Terpenoid TPS medium pass TPS__00099__sp_F2XF97_AHUMS_PICGL
PITA_000064160-RA Terpenoid TPS medium pass TPS__00099__sp_F2XF97_AHUMS_PICGL
PITA_000064222-RA Terpenoid TPS medium pass TPS__00142__sp_M4HXW5_MISO1_PINBN
PITA_000064284-RA Terpenoid TPS medium pass TPS__00182__sp_R9QMW1_SPIN1_PINBN
PITA_000064372-RA Terpenoid TPS medium pass TPS__00181__sp_R9QMR6_3CAR2_PINBN
PITA_000064373-RA Terpenoid TPS medium pass TPS__00093__sp_F1CKJ1_SSS_PICSI
PITA_000064385-RA Terpenoid TPS medium pass TPS__00015__sp_A0A1L6Z3A5_TPS5_PSEAD
PITA_000065035-RA Terpenoid TPS medium pass TPS__00144__sp_M4HY08_MPIM1_PINBN
PITA_000065036-RA Terpenoid TPS medium pass TPS__00144__sp_M4HY08_MPIM1_PINBN
PITA_000065460-RA Terpenoid TPS medium pass TPS__00146__sp_M4HYC8_MPIM1_PINCO
PITA_000066555-RA Terpenoid TPS medium pass TPS__00094__sp_F2XF92_ISOPS_PICSI
PITA_000067102-RA Terpenoid TPS medium pass TPS__00015__sp_A0A1L6Z3A5_TPS5_PSEAD
PITA_000067795-RA Terpenoid TPS medium pass TPS__00161__sp_Q675L0_TPSLS_PICAB
PITA_000067884-RA Terpenoid TPS medium pass TPS__00183__sp_R9QMW2_RAPN1_PINCO
PITA_000067885-RA Terpenoid TPS medium pass TPS__00177__sp_R9QMR1_RAPN1_PINBN
PITA_000067909-RA Terpenoid TPS low borderline TPS__00099__sp_F2XF97_AHUMS_PICGL
PITA_000068311-RA Terpenoid TPS medium pass TPS__00099__sp_F2XF97_AHUMS_PICGL
PITA_000068640-RA Terpenoid TPS medium pass TPS__00180__sp_R9QMR5_ATERP_PINBN
PITA_000069537-RA Terpenoid TPS low borderline TPS__00141__sp_M4HXU6_TPSD1_PINBN
PITA_000070083-RA Terpenoid TPS medium pass TPS__00191__sp_R9QMZ0_ATERP_PINCO
PITA_000070114-RA Terpenoid TPS medium pass TPS__00102__sp_F2XFA0_TPSLS_PICXS
PITA_000070115-RA Terpenoid TPS medium pass TPS__00068__sp_C0PPM5_ALGPS_PICSI
PITA_000070696-RA Terpenoid TPS medium pass TPS__00145__sp_M4HYC6_TPSD2_PINCO
PITA_000070697-RA Terpenoid TPS medium pass TPS__00094__sp_F2XF92_ISOPS_PICSI
PITA_000070698-RA Terpenoid TPS medium pass TPS__00145__sp_M4HYC6_TPSD2_PINCO
PITA_000070699-RA Terpenoid TPS low borderline TPS__00145__sp_M4HYC6_TPSD2_PINCO
PITA_000070819-RA Terpenoid TPS medium pass TPS__00191__sp_R9QMZ0_ATERP_PINCO
PITA_000070820-RA Terpenoid TPS medium pass TPS__00180__sp_R9QMR5_ATERP_PINBN
PITA_000071074-RA Terpenoid TPS low borderline TPS__00069__sp_C0PPR1_LLOS2_PICSI
PITA_000071150-RA Terpenoid TPS medium pass TPS__00102__sp_F2XFA0_TPSLS_PICXS
PITA_000071802-RA Terpenoid TPS medium pass TPS__00145__sp_M4HYC6_TPSD2_PINCO
PITA_000072087-RA Terpenoid TPS medium pass TPS__00180__sp_R9QMR5_ATERP_PINBN
PITA_000072088-RA Terpenoid TPS medium pass TPS__00069__sp_C0PPR1_LLOS2_PICSI
PITA_000072098-RA Terpenoid TPS medium pass TPS__00099__sp_F2XF97_AHUMS_PICGL
PITA_000072099-RA Terpenoid TPS medium pass TPS__00099__sp_F2XF97_AHUMS_PICGL
PITA_000072101-RA Terpenoid TPS medium pass TPS__00099__sp_F2XF97_AHUMS_PICGL
PITA_000072122-RA Terpenoid TPS medium pass TPS__00145__sp_M4HYC6_TPSD2_PINCO
PITA_000072123-RA Terpenoid TPS medium pass TPS__00145__sp_M4HYC6_TPSD2_PINCO
PITA_000073304-RA Terpenoid TPS medium pass TPS__00152__sp_Q20HU7_LIMNS_PICSI