PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

6129
Candidate Protein Records
5262
Pathway-Level Records
12692
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TPS
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Protein/Isoform Record Pathway Family Confidence Status
PITA_000073505-RA Terpenoid TPS medium pass
PITA_000073628-RA Terpenoid TPS medium pass
PITA_000073888-RA Terpenoid TPS medium pass
PITA_000073941-RA Terpenoid TPS medium pass
PITA_000074056-RA Terpenoid TPS medium pass
PITA_000074983-RA Terpenoid TPS medium pass
PITA_000075203-RA Terpenoid TPS medium pass
PITA_000075777-RA Terpenoid TPS low borderline
PITA_000075778-RA Terpenoid TPS medium pass
PITA_000075921-RA Terpenoid TPS medium pass
PITA_000075922-RA Terpenoid TPS medium pass
PITA_000075965-RA Terpenoid TPS medium pass
PITA_000076002-RA Terpenoid TPS medium pass
PITA_000076003-RA Terpenoid TPS medium pass
PITA_000076715-RA Terpenoid TPS medium pass
PITA_000077177-RA Terpenoid TPS medium pass
PITA_000077719-RA Terpenoid TPS medium pass
PITA_000078259-RA Terpenoid TPS medium pass
PITA_000078302-RA Terpenoid TPS medium pass
PITA_000078444-RA Terpenoid TPS medium pass
PITA_000078715-RA Terpenoid TPS medium pass
PITA_000078788-RA Terpenoid TPS low borderline
PITA_000078947-RA Terpenoid TPS medium pass
PITA_000079354-RA Terpenoid TPS medium pass
PITA_000079471-RA Terpenoid TPS medium pass
PITA_000079512-RA Terpenoid TPS low borderline
PITA_000079854-RA Terpenoid TPS medium pass
PITA_000080108-RA Terpenoid TPS medium pass
PITA_000080199-RA Terpenoid TPS medium pass
PITA_000080200-RA Terpenoid TPS medium pass
PITA_000080390-RA Terpenoid TPS medium pass
PITA_000080393-RA Terpenoid TPS medium pass
PITA_000080607-RA Terpenoid TPS medium pass
PITA_000080668-RA Terpenoid TPS medium pass
PITA_000080767-RA Terpenoid TPS medium pass
PITA_000080779-RA Terpenoid TPS medium pass
PITA_000080882-RA Terpenoid TPS medium pass
PITA_000080906-RA Terpenoid TPS medium pass
PITA_000081120-RA Terpenoid TPS medium pass
PITA_000081231-RA Terpenoid TPS medium pass
PITA_000081232-RA Terpenoid TPS medium pass
PITA_000081233-RA Terpenoid TPS low borderline
PITA_000081290-RA Terpenoid TPS medium pass
PITA_000081426-RA Terpenoid TPS low borderline
PITA_000082031-RA Terpenoid TPS medium pass
PITA_000082574-RA Terpenoid TPS medium pass
PITA_000082835-RA Terpenoid TPS medium pass
PITA_000082836-RA Terpenoid TPS medium pass
PITA_000082993-RA Terpenoid TPS medium pass
PITA_000083789-RA Terpenoid TPS medium pass