PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

6129
Candidate Protein Records
5262
Pathway-Level Records
12692
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TPS
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Protein/Isoform Record Pathway Family Confidence Status
PITA_000083843-RA Terpenoid TPS medium pass
PITA_000084151-RA Terpenoid TPS medium pass
PITA_000084227-RA Terpenoid TPS medium pass
PITA_000084532-RA Terpenoid TPS medium pass
PITA_000085218-RA Terpenoid TPS medium pass
PITA_000085757-RA Terpenoid TPS medium pass
PITA_000085933-RA Terpenoid TPS medium pass
PITA_000085967-RA Terpenoid TPS medium pass
PITA_000086056-RA Terpenoid TPS medium pass
PITA_000086089-RA Terpenoid TPS medium pass
PITA_000086277-RA Terpenoid TPS low borderline
PITA_000086419-RA Terpenoid TPS medium pass
PITA_000086584-RA Terpenoid TPS medium pass
PITA_000086597-RA Terpenoid TPS medium pass
PITA_000086679-RA Terpenoid TPS medium pass
PITA_000087002-RA Terpenoid TPS medium pass
PITA_000087003-RA Terpenoid TPS medium pass
PITA_000087151-RA Terpenoid TPS medium pass
PITA_000087152-RA Terpenoid TPS low borderline
PITA_000087458-RA Terpenoid TPS medium pass
PITA_000087462-RA Terpenoid TPS medium pass
PITA_000087508-RA Terpenoid TPS medium pass
PITA_000087551-RA Terpenoid TPS medium pass
PITA_000088046-RA Terpenoid TPS medium pass
PITA_000088159-RA Terpenoid TPS medium pass
PITA_000088160-RA Terpenoid TPS medium pass
PITA_000089027-RA Terpenoid TPS medium pass
PITA_000089064-RA Terpenoid TPS medium pass
PITA_000089087-RA Terpenoid TPS medium pass
PITA_000089092-RA Terpenoid TPS medium pass
PITA_000089555-RA Terpenoid TPS medium pass
PITA_000089903-RA Terpenoid TPS medium pass
PITA_000090153-RA Terpenoid TPS medium pass
PITA_000090154-RA Terpenoid TPS medium pass
PITA_000090155-RA Terpenoid TPS medium pass
PITA_000090295-RA Terpenoid TPS medium pass
PITA_000090322-RA Terpenoid TPS medium pass
PITA_000090342-RA Terpenoid TPS medium pass
PITA_000090365-RA Terpenoid TPS medium pass
PITA_000090552-RA Terpenoid TPS medium pass
PITA_000090556-RA Terpenoid TPS medium pass
PITA_000090718-RA Terpenoid TPS medium pass
PITA_000091188-RA Terpenoid TPS medium pass
PITA_000091516-RA Terpenoid TPS medium pass
PITA_000092419-RA Terpenoid TPS medium pass
PITA_000092527-RA Terpenoid TPS medium pass
PITA_000092929-RA Terpenoid TPS medium pass
PITA_000092953-RA Terpenoid TPS medium pass
PITA_000093114-RA Terpenoid TPS medium pass
PITA_000093367-RA Terpenoid TPS medium pass