PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

5262
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: UFGT
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Gene Pathway Family Confidence Status
PITA_000014566-RA Flavonoid UFGT high pass
PITA_000014574-RA Flavonoid UFGT high pass
PITA_000014594-RA Flavonoid UFGT medium pass
PITA_000014598-RA Flavonoid UFGT low borderline
PITA_000015264-RA Flavonoid UFGT high pass
PITA_000015764-RA Flavonoid UFGT high pass
PITA_000015765-RA Flavonoid UFGT high pass
PITA_000016479-RA Flavonoid UFGT high pass
PITA_000016680-RA Flavonoid UFGT low borderline
PITA_000016681-RA Flavonoid UFGT medium pass
PITA_000016686-RA Flavonoid UFGT low borderline
PITA_000016835-RA Flavonoid UFGT medium pass
PITA_000016840-RA Flavonoid UFGT medium pass
PITA_000016841-RA Flavonoid UFGT low borderline
PITA_000017223-RA Flavonoid UFGT high pass
PITA_000017645-RA Flavonoid UFGT medium pass
PITA_000019307-RA Flavonoid UFGT medium pass
PITA_000020010-RA Flavonoid UFGT medium pass
PITA_000020213-RA Flavonoid UFGT high pass
PITA_000020941-RA Flavonoid UFGT low borderline
PITA_000021881-RA Flavonoid UFGT high pass
PITA_000021895-RA Flavonoid UFGT low borderline
PITA_000021946-RA Flavonoid UFGT high pass
PITA_000022084-RA Flavonoid UFGT medium pass
PITA_000022171-RA Flavonoid UFGT high pass
PITA_000022172-RA Flavonoid UFGT high pass
PITA_000022566-RA Flavonoid UFGT medium pass
PITA_000023662-RA Flavonoid UFGT low borderline
PITA_000023663-RA Flavonoid UFGT medium pass
PITA_000023706-RA Flavonoid UFGT high pass
PITA_000023748-RA Flavonoid UFGT high pass
PITA_000023761-RA Flavonoid UFGT medium pass
PITA_000023762-RA Flavonoid UFGT low borderline
PITA_000024203-RA Flavonoid UFGT medium pass
PITA_000024207-RA Flavonoid UFGT medium pass
PITA_000024257-RA Flavonoid UFGT medium pass
PITA_000024258-RA Flavonoid UFGT high pass
PITA_000024316-RA Flavonoid UFGT high pass
PITA_000024317-RA Flavonoid UFGT high pass
PITA_000024776-RA Flavonoid UFGT low borderline
PITA_000025329-RA Flavonoid UFGT high pass
PITA_000026317-RA Flavonoid UFGT medium pass
PITA_000026503-RA Flavonoid UFGT low borderline
PITA_000026661-RA Flavonoid UFGT high pass
PITA_000027067-RA Flavonoid UFGT medium pass
PITA_000027068-RA Flavonoid UFGT low borderline
PITA_000027220-RA Flavonoid UFGT medium pass
PITA_000027927-RA Flavonoid UFGT low borderline
PITA_000029227-RA Flavonoid UFGT high pass
PITA_000029274-RA Flavonoid UFGT medium pass