PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

5262
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: UFGT
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Gene Pathway Family Confidence Status
PITA_000029290-RA Flavonoid UFGT medium pass
PITA_000029615-RA Flavonoid UFGT medium pass
PITA_000029617-RA Flavonoid UFGT medium pass
PITA_000029928-RA Flavonoid UFGT high pass
PITA_000029929-RA Flavonoid UFGT low borderline
PITA_000029931-RA Flavonoid UFGT medium pass
PITA_000031343-RA Flavonoid UFGT medium pass
PITA_000031665-RA Flavonoid UFGT low borderline
PITA_000031861-RA Flavonoid UFGT high pass
PITA_000031898-RA Flavonoid UFGT medium pass
PITA_000032390-RA Flavonoid UFGT medium pass
PITA_000032645-RA Flavonoid UFGT high pass
PITA_000032646-RA Flavonoid UFGT high pass
PITA_000032648-RA Flavonoid UFGT high pass
PITA_000033093-RA Flavonoid UFGT medium pass
PITA_000033548-RA Flavonoid UFGT medium pass
PITA_000033695-RA Flavonoid UFGT medium pass
PITA_000034018-RA Flavonoid UFGT medium pass
PITA_000034475-RA Flavonoid UFGT medium pass
PITA_000034478-RA Flavonoid UFGT high pass
PITA_000034543-RA Flavonoid UFGT low borderline
PITA_000034544-RA Flavonoid UFGT medium pass
PITA_000035081-RA Flavonoid UFGT high pass
PITA_000035125-RA Flavonoid UFGT medium pass
PITA_000035134-RA Flavonoid UFGT high pass
PITA_000035359-RA Flavonoid UFGT high pass
PITA_000035655-RA Flavonoid UFGT high pass
PITA_000035811-RA Flavonoid UFGT high pass
PITA_000036215-RA Flavonoid UFGT low borderline
PITA_000036982-RA Flavonoid UFGT medium pass
PITA_000037271-RA Flavonoid UFGT medium pass
PITA_000037272-RA Flavonoid UFGT medium pass
PITA_000037586-RA Flavonoid UFGT low borderline
PITA_000037606-RA Flavonoid UFGT medium pass
PITA_000037701-RA Flavonoid UFGT high pass
PITA_000037702-RA Flavonoid UFGT medium pass
PITA_000037801-RA Flavonoid UFGT medium pass
PITA_000037873-RA Flavonoid UFGT high pass
PITA_000037876-RA Flavonoid UFGT medium pass
PITA_000038617-RA Flavonoid UFGT medium pass
PITA_000038781-RA Flavonoid UFGT medium pass
PITA_000039377-RA Flavonoid UFGT high pass
PITA_000040035-RA Flavonoid UFGT low borderline
PITA_000040037-RA Flavonoid UFGT low borderline
PITA_000040038-RA Flavonoid UFGT low borderline
PITA_000040823-RA Flavonoid UFGT medium pass
PITA_000040888-RA Flavonoid UFGT high pass
PITA_000041634-RA Flavonoid UFGT medium pass
PITA_000041635-RA Flavonoid UFGT medium pass
PITA_000041820-RA Flavonoid UFGT high pass