PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

5262
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: UFGT
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Gene Pathway Family Confidence Status
PITA_000041824-RA Flavonoid UFGT high pass
PITA_000041826-RA Flavonoid UFGT low borderline
PITA_000041827-RA Flavonoid UFGT high pass
PITA_000042502-RA Flavonoid UFGT high pass
PITA_000042516-RA Flavonoid UFGT low borderline
PITA_000042519-RA Flavonoid UFGT high pass
PITA_000042569-RA Flavonoid UFGT high pass
PITA_000042571-RA Flavonoid UFGT high pass
PITA_000042786-RA Flavonoid UFGT medium pass
PITA_000042996-RA Flavonoid UFGT medium pass
PITA_000044057-RA Flavonoid UFGT high pass
PITA_000044319-RA Flavonoid UFGT medium pass
PITA_000044820-RA Flavonoid UFGT low borderline
PITA_000044838-RA Flavonoid UFGT low borderline
PITA_000044846-RA Flavonoid UFGT medium pass
PITA_000044876-RA Flavonoid UFGT medium pass
PITA_000045495-RA Flavonoid UFGT high pass
PITA_000045512-RA Flavonoid UFGT medium pass
PITA_000045755-RA Flavonoid UFGT high pass
PITA_000046391-RA Flavonoid UFGT medium pass
PITA_000046625-RA Flavonoid UFGT high pass
PITA_000046766-RA Flavonoid UFGT medium pass
PITA_000047044-RA Flavonoid UFGT medium pass
PITA_000047045-RA Flavonoid UFGT medium pass
PITA_000047582-RA Flavonoid UFGT high pass
PITA_000047646-RA Flavonoid UFGT low borderline
PITA_000047788-RA Flavonoid UFGT medium pass
PITA_000048176-RA Flavonoid UFGT high pass
PITA_000048706-RA Flavonoid UFGT low borderline
PITA_000048810-RA Flavonoid UFGT low borderline
PITA_000049147-RA Flavonoid UFGT medium pass
PITA_000049390-RA Flavonoid UFGT medium pass
PITA_000049394-RA Flavonoid UFGT high pass
PITA_000049780-RA Flavonoid UFGT low borderline
PITA_000050251-RA Flavonoid UFGT high pass
PITA_000050381-RA Flavonoid UFGT low borderline
PITA_000050777-RA Flavonoid UFGT medium pass
PITA_000050819-RA Flavonoid UFGT medium pass
PITA_000050841-RA Flavonoid UFGT medium pass
PITA_000050842-RA Flavonoid UFGT low borderline
PITA_000051383-RA Flavonoid UFGT medium pass
PITA_000051674-RA Flavonoid UFGT high pass
PITA_000051707-RA Flavonoid UFGT medium pass
PITA_000051936-RA Flavonoid UFGT medium pass
PITA_000052139-RA Flavonoid UFGT medium pass
PITA_000052357-RA Flavonoid UFGT high pass
PITA_000052622-RA Flavonoid UFGT low borderline
PITA_000052999-RA Flavonoid UFGT low borderline
PITA_000053117-RA Flavonoid UFGT low borderline
PITA_000053205-RA Flavonoid UFGT high pass