PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

6129
Candidate Protein Records
5262
Pathway-Level Records
12692
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: UFGT
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Protein/Isoform Record Pathway Family Confidence Status
PITA_000065592-RA Flavonoid UFGT medium pass
PITA_000065607-RA Flavonoid UFGT low borderline
PITA_000065723-RA Flavonoid UFGT medium pass
PITA_000065823-RA Flavonoid UFGT low borderline
PITA_000066465-RA Flavonoid UFGT high pass
PITA_000066478-RA Flavonoid UFGT high pass
PITA_000066645-RA Flavonoid UFGT low borderline
PITA_000066973-RA Flavonoid UFGT high pass
PITA_000067002-RA Flavonoid UFGT high pass
PITA_000067043-RA Flavonoid UFGT low borderline
PITA_000068190-RA Flavonoid UFGT high pass
PITA_000068446-RA Flavonoid UFGT medium pass
PITA_000068482-RA Flavonoid UFGT medium pass
PITA_000068498-RA Flavonoid UFGT low borderline
PITA_000068511-RA Flavonoid UFGT low borderline
PITA_000068560-RA Flavonoid UFGT medium pass
PITA_000068607-RA Flavonoid UFGT medium pass
PITA_000068968-RA Flavonoid UFGT medium pass
PITA_000069092-RA Flavonoid UFGT low borderline
PITA_000069518-RA Flavonoid UFGT medium pass
PITA_000069605-RA Flavonoid UFGT high pass
PITA_000069654-RA Flavonoid UFGT low borderline
PITA_000069767-RA Flavonoid UFGT medium pass
PITA_000070006-RA Flavonoid UFGT high pass
PITA_000070206-RA Flavonoid UFGT medium pass
PITA_000070225-RA Flavonoid UFGT medium pass
PITA_000070255-RA Flavonoid UFGT low borderline
PITA_000070370-RA Flavonoid UFGT medium pass
PITA_000070447-RA Flavonoid UFGT low borderline
PITA_000070609-RA Flavonoid UFGT high pass
PITA_000070782-RA Flavonoid UFGT low borderline
PITA_000070783-RA Flavonoid UFGT low borderline
PITA_000070808-RA Flavonoid UFGT high pass
PITA_000071019-RA Flavonoid UFGT high pass
PITA_000071509-RA Flavonoid UFGT high pass
PITA_000072136-RA Flavonoid UFGT medium pass
PITA_000072368-RA Flavonoid UFGT low borderline
PITA_000072396-RA Flavonoid UFGT medium pass
PITA_000072515-RA Flavonoid UFGT high pass
PITA_000072608-RA Flavonoid UFGT high pass
PITA_000072697-RA Flavonoid UFGT medium pass
PITA_000072758-RA Flavonoid UFGT high pass
PITA_000072871-RA Flavonoid UFGT medium pass
PITA_000072923-RA Flavonoid UFGT low borderline
PITA_000073260-RA Flavonoid UFGT low borderline
PITA_000073282-RA Flavonoid UFGT high pass
PITA_000073296-RA Flavonoid UFGT medium pass
PITA_000073545-RA Flavonoid UFGT high pass
PITA_000073631-RA Flavonoid UFGT high pass
PITA_000073665-RA Flavonoid UFGT low borderline