PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

6129
Candidate Protein Records
5262
Pathway-Level Records
12692
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: UFGT
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Protein/Isoform Record Pathway Family Confidence Status
PITA_000073807-RA Flavonoid UFGT high pass
PITA_000073911-RA Flavonoid UFGT high pass
PITA_000073915-RA Flavonoid UFGT low borderline
PITA_000074912-RA Flavonoid UFGT high pass
PITA_000075041-RA Flavonoid UFGT medium pass
PITA_000075188-RA Flavonoid UFGT low borderline
PITA_000075309-RA Flavonoid UFGT low borderline
PITA_000075358-RA Flavonoid UFGT medium pass
PITA_000075596-RA Flavonoid UFGT high pass
PITA_000075637-RA Flavonoid UFGT low borderline
PITA_000075794-RA Flavonoid UFGT medium pass
PITA_000075833-RA Flavonoid UFGT high pass
PITA_000076035-RA Flavonoid UFGT medium pass
PITA_000076438-RA Flavonoid UFGT low borderline
PITA_000076587-RA Flavonoid UFGT medium pass
PITA_000076721-RA Flavonoid UFGT high pass
PITA_000076798-RA Flavonoid UFGT high pass
PITA_000077008-RA Flavonoid UFGT low borderline
PITA_000077037-RA Flavonoid UFGT medium pass
PITA_000077098-RA Flavonoid UFGT high pass
PITA_000077283-RA Flavonoid UFGT low borderline
PITA_000077536-RA Flavonoid UFGT medium pass
PITA_000077724-RA Flavonoid UFGT high pass
PITA_000078102-RA Flavonoid UFGT low borderline
PITA_000078103-RA Flavonoid UFGT high pass
PITA_000078238-RA Flavonoid UFGT medium pass
PITA_000078549-RA Flavonoid UFGT medium pass
PITA_000078553-RA Flavonoid UFGT medium pass
PITA_000078775-RA Flavonoid UFGT high pass
PITA_000079103-RA Flavonoid UFGT medium pass
PITA_000079329-RA Flavonoid UFGT high pass
PITA_000079776-RA Flavonoid UFGT low borderline
PITA_000080558-RA Flavonoid UFGT medium pass
PITA_000081006-RA Flavonoid UFGT medium pass
PITA_000081062-RA Flavonoid UFGT medium pass
PITA_000081156-RA Flavonoid UFGT high pass
PITA_000081189-RA Flavonoid UFGT high pass
PITA_000081309-RA Flavonoid UFGT high pass
PITA_000081428-RA Flavonoid UFGT high pass
PITA_000081597-RA Flavonoid UFGT medium pass
PITA_000081799-RA Flavonoid UFGT high pass
PITA_000081899-RA Flavonoid UFGT low borderline
PITA_000082009-RA Flavonoid UFGT low borderline
PITA_000082800-RA Flavonoid UFGT medium pass
PITA_000082893-RA Flavonoid UFGT medium pass
PITA_000083033-RA Flavonoid UFGT high pass
PITA_000083718-RA Flavonoid UFGT medium pass
PITA_000084010-RA Flavonoid UFGT high pass
PITA_000084075-RA Flavonoid UFGT medium pass
PITA_000084236-RA Flavonoid UFGT high pass