PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

6129
Candidate Protein Records
5262
Pathway-Level Records
12692
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
PITA_000076587-RA Alkaloid 7DLGT low borderline
PITA_000076692-RA Alkaloid 7DLGT low borderline
PITA_000076721-RA Alkaloid 7DLGT medium pass
PITA_000076798-RA Alkaloid 7DLGT medium pass
PITA_000077008-RA Alkaloid 7DLGT low borderline
PITA_000077037-RA Alkaloid 7DLGT low borderline
PITA_000077095-RA Alkaloid 7DLGT low borderline
PITA_000077098-RA Alkaloid 7DLGT medium pass
PITA_000077214-RA Alkaloid 7DLGT low borderline
PITA_000077536-RA Alkaloid 7DLGT medium pass
PITA_000077724-RA Alkaloid 7DLGT medium pass
PITA_000078102-RA Alkaloid 7DLGT low borderline
PITA_000078103-RA Alkaloid 7DLGT medium pass
PITA_000078238-RA Alkaloid 7DLGT medium pass
PITA_000078549-RA Alkaloid 7DLGT low borderline
PITA_000078553-RA Alkaloid 7DLGT low borderline
PITA_000078607-RA Alkaloid 7DLGT low borderline
PITA_000078775-RA Alkaloid 7DLGT high pass
PITA_000079103-RA Alkaloid 7DLGT low borderline
PITA_000079329-RA Alkaloid 7DLGT low borderline
PITA_000080558-RA Alkaloid 7DLGT low borderline
PITA_000081006-RA Alkaloid 7DLGT medium pass
PITA_000081062-RA Alkaloid 7DLGT low borderline
PITA_000081156-RA Alkaloid 7DLGT medium pass
PITA_000081189-RA Alkaloid 7DLGT low borderline
PITA_000081193-RA Alkaloid 7DLGT medium pass
PITA_000081309-RA Alkaloid 7DLGT low borderline
PITA_000081428-RA Alkaloid 7DLGT medium pass
PITA_000081597-RA Alkaloid 7DLGT medium pass
PITA_000081799-RA Alkaloid 7DLGT medium pass
PITA_000082009-RA Alkaloid 7DLGT low borderline
PITA_000082800-RA Alkaloid 7DLGT medium pass
PITA_000082893-RA Alkaloid 7DLGT high pass
PITA_000083033-RA Alkaloid 7DLGT medium pass
PITA_000083246-RA Alkaloid 7DLGT low borderline
PITA_000083593-RA Alkaloid 7DLGT medium pass
PITA_000083681-RA Alkaloid 7DLGT low borderline
PITA_000083718-RA Alkaloid 7DLGT medium pass
PITA_000084010-RA Alkaloid 7DLGT medium pass
PITA_000084075-RA Alkaloid 7DLGT medium pass
PITA_000084236-RA Alkaloid 7DLGT medium pass
PITA_000084413-RA Alkaloid 7DLGT low borderline
PITA_000084437-RA Alkaloid 7DLGT low borderline
PITA_000085122-RA Alkaloid 7DLGT medium pass
PITA_000085229-RA Alkaloid 7DLGT low borderline
PITA_000085371-RA Alkaloid 7DLGT low borderline
PITA_000085372-RA Alkaloid 7DLGT medium pass
PITA_000085381-RA Alkaloid 7DLGT medium pass
PITA_000085431-RA Alkaloid 7DLGT low borderline
PITA_000085460-RA Alkaloid 7DLGT low borderline