PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

6129
Candidate Protein Records
5262
Pathway-Level Records
12692
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
PITA_000068498-RA Alkaloid 7DLGT low borderline
PITA_000068511-RA Alkaloid 7DLGT low borderline
PITA_000068560-RA Alkaloid 7DLGT low borderline
PITA_000068607-RA Alkaloid 7DLGT medium pass
PITA_000068968-RA Alkaloid 7DLGT medium pass
PITA_000069518-RA Alkaloid 7DLGT high pass
PITA_000069605-RA Alkaloid 7DLGT high pass
PITA_000069654-RA Alkaloid 7DLGT low borderline
PITA_000069767-RA Alkaloid 7DLGT low borderline
PITA_000070006-RA Alkaloid 7DLGT medium pass
PITA_000070206-RA Alkaloid 7DLGT medium pass
PITA_000070225-RA Alkaloid 7DLGT medium pass
PITA_000070255-RA Alkaloid 7DLGT low borderline
PITA_000070260-RA Alkaloid 7DLGT low borderline
PITA_000070370-RA Alkaloid 7DLGT medium pass
PITA_000070609-RA Alkaloid 7DLGT low borderline
PITA_000070782-RA Alkaloid 7DLGT low borderline
PITA_000070783-RA Alkaloid 7DLGT low borderline
PITA_000070808-RA Alkaloid 7DLGT medium pass
PITA_000071019-RA Alkaloid 7DLGT high pass
PITA_000071509-RA Alkaloid 7DLGT medium pass
PITA_000072136-RA Alkaloid 7DLGT medium pass
PITA_000072368-RA Alkaloid 7DLGT low borderline
PITA_000072396-RA Alkaloid 7DLGT medium pass
PITA_000072515-RA Alkaloid 7DLGT medium pass
PITA_000072608-RA Alkaloid 7DLGT low borderline
PITA_000072697-RA Alkaloid 7DLGT medium pass
PITA_000072758-RA Alkaloid 7DLGT medium pass
PITA_000072871-RA Alkaloid 7DLGT medium pass
PITA_000072923-RA Alkaloid 7DLGT low borderline
PITA_000072927-RA Alkaloid 7DLGT medium pass
PITA_000073282-RA Alkaloid 7DLGT low borderline
PITA_000073296-RA Alkaloid 7DLGT medium pass
PITA_000073545-RA Alkaloid 7DLGT medium pass
PITA_000073631-RA Alkaloid 7DLGT medium pass
PITA_000073665-RA Alkaloid 7DLGT low borderline
PITA_000073807-RA Alkaloid 7DLGT low borderline
PITA_000073911-RA Alkaloid 7DLGT high pass
PITA_000074485-RA Alkaloid 7DLGT low borderline
PITA_000074912-RA Alkaloid 7DLGT low borderline
PITA_000074975-RA Alkaloid 7DLGT medium pass
PITA_000075041-RA Alkaloid 7DLGT medium pass
PITA_000075188-RA Alkaloid 7DLGT low borderline
PITA_000075358-RA Alkaloid 7DLGT medium pass
PITA_000075596-RA Alkaloid 7DLGT medium pass
PITA_000075637-RA Alkaloid 7DLGT low borderline
PITA_000075794-RA Alkaloid 7DLGT low borderline
PITA_000075833-RA Alkaloid 7DLGT medium pass
PITA_000076035-RA Alkaloid 7DLGT low borderline
PITA_000076438-RA Alkaloid 7DLGT low borderline