PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

6129
Candidate Protein Records
5262
Pathway-Level Records
12692
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
PITA_000057297-RA Flavonoid DFR low borderline
PITA_000058448-RA Flavonoid DFR medium borderline
PITA_000060926-RA Flavonoid DFR low borderline
PITA_000061701-RA Flavonoid DFR low borderline
PITA_000062308-RA Flavonoid DFR low borderline
PITA_000062448-RA Flavonoid DFR medium borderline
PITA_000064304-RA Flavonoid DFR medium pass
PITA_000069349-RA Flavonoid DFR medium borderline
PITA_000072634-RA Flavonoid DFR low borderline
PITA_000075875-RA Flavonoid DFR low borderline
PITA_000076698-RA Flavonoid DFR medium borderline
PITA_000078774-RA Flavonoid DFR medium borderline
PITA_000079358-RA Flavonoid DFR low borderline
PITA_000079681-RA Flavonoid DFR medium borderline
PITA_000080117-RA Flavonoid DFR low borderline
PITA_000080358-RA Flavonoid DFR medium borderline
PITA_000080530-RA Flavonoid DFR medium borderline
PITA_000084016-RA Flavonoid DFR medium borderline
PITA_000087665-RA Flavonoid DFR medium borderline
PITA_000088426-RA Flavonoid DFR medium borderline
PITA_000089692-RA Flavonoid DFR medium borderline
PITA_000092907-RA Flavonoid DFR medium borderline
PITA_000094177-RA Flavonoid DFR medium borderline
PITAhm_003329-RA Flavonoid DFR medium borderline
3A_all_VO_L_45670_T_3/7|m.29968.mrna1 Flavonoid F3'5'H/CYP75A medium borderline
3A_all_VO_L_45670_T_3/7|m.29968.mrna2 Flavonoid F3'5'H/CYP75A medium borderline
5A_I7_NT_comp32793_c0_seq1|m.49919.mrna1 Flavonoid F3'5'H/CYP75A medium borderline
5A_I7_NT_comp32793_c0_seq1|m.49919.mrna2 Flavonoid F3'5'H/CYP75A medium borderline
5A_I7_NT_comp32793_c0_seq1|m.49919.mrna3 Flavonoid F3'5'H/CYP75A medium borderline
PITA_000004010-RA Flavonoid F3'5'H/CYP75A medium borderline
PITA_000004871-RA Flavonoid F3'5'H/CYP75A medium borderline
PITA_000006072-RA Flavonoid F3'5'H/CYP75A medium borderline
PITA_000006776-RA Flavonoid F3'5'H/CYP75A medium borderline
PITA_000007062-RA Flavonoid F3'5'H/CYP75A medium borderline
PITA_000011474-RA Flavonoid F3'5'H/CYP75A low borderline
PITA_000013490-RA Flavonoid F3'5'H/CYP75A medium borderline
PITA_000014468-RA Flavonoid F3'5'H/CYP75A low borderline
PITA_000014938-RA Flavonoid F3'5'H/CYP75A low borderline
PITA_000015914-RA Flavonoid F3'5'H/CYP75A medium borderline
PITA_000016126-RA Flavonoid F3'5'H/CYP75A medium borderline
PITA_000018200-RA Flavonoid F3'5'H/CYP75A medium borderline
PITA_000021125-RA Flavonoid F3'5'H/CYP75A low borderline
PITA_000022034-RA Flavonoid F3'5'H/CYP75A medium borderline
PITA_000023051-RA Flavonoid F3'5'H/CYP75A medium borderline
PITA_000023557-RA Flavonoid F3'5'H/CYP75A medium borderline
PITA_000023807-RA Flavonoid F3'5'H/CYP75A low borderline
PITA_000024089-RA Flavonoid F3'5'H/CYP75A medium borderline
PITA_000025415-RA Flavonoid F3'5'H/CYP75A medium borderline
PITA_000027632-RA Flavonoid F3'5'H/CYP75A medium borderline
PITA_000028220-RA Flavonoid F3'5'H/CYP75A low borderline