PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

6129
Candidate Protein Records
5262
Pathway-Level Records
12692
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Protein/Isoform Record Pathway Family Confidence Status
PITA_000030991-RA Steroid CYP90D1 low borderline
PITA_000031001-RA Steroid CYP90D1 low borderline
PITA_000032176-RA Steroid CYP90D1 low borderline
PITA_000033586-RA Steroid CYP90D1 low borderline
PITA_000036583-RA Steroid CYP90D1 low borderline
PITA_000037777-RA Steroid CYP90D1 low borderline
PITA_000045592-RA Steroid CYP90D1 low borderline
PITA_000046806-RA Steroid CYP90D1 medium borderline
PITA_000047291-RA Steroid CYP90D1 low borderline
PITA_000051299-RA Steroid CYP90D1 low borderline
PITA_000051406-RA Steroid CYP90D1 low borderline
PITA_000052927-RA Steroid CYP90D1 low borderline
PITA_000053270-RA Steroid CYP90D1 low borderline
PITA_000053544-RA Steroid CYP90D1 medium borderline
PITA_000055651-RA Steroid CYP90D1 medium borderline
PITA_000055794-RA Steroid CYP90D1 low borderline
PITA_000057647-RA Steroid CYP90D1 low borderline
PITA_000060494-RA Steroid CYP90D1 low borderline
PITA_000062453-RA Steroid CYP90D1 low borderline
PITA_000064624-RA Steroid CYP90D1 low borderline
PITA_000066295-RA Steroid CYP90D1 medium borderline
PITA_000068989-RA Steroid CYP90D1 low borderline
PITA_000074612-RA Steroid CYP90D1 low borderline
PITA_000074613-RA Steroid CYP90D1 low borderline
PITA_000074643-RA Steroid CYP90D1 low borderline
PITA_000076706-RA Steroid CYP90D1 low borderline
PITA_000077112-RA Steroid CYP90D1 low borderline
PITA_000078716-RA Steroid CYP90D1 low borderline
PITA_000078717-RA Steroid CYP90D1 medium borderline
PITA_000079019-RA Steroid CYP90D1 low borderline
PITA_000080128-RA Steroid CYP90D1 low borderline
PITA_000081073-RA Steroid CYP90D1 low borderline
PITA_000083594-RA Steroid CYP90D1 low borderline
PITA_000084671-RA Steroid CYP90D1 low borderline
PITA_000086235-RA Steroid CYP90D1 low borderline
PITA_000089328-RA Steroid CYP90D1 low borderline
PITA_000090075-RA Steroid CYP90D1 low borderline
PITA_000090756-RA Steroid CYP90D1 low borderline
PITA_000092952-RA Steroid CYP90D1 low borderline
PITA_000093010-RA Steroid CYP90D1 low borderline
PITA_000093430-RA Steroid CYP90D1 medium borderline
PITA_000094495-RA Steroid CYP90D1 low borderline
PITA_000094681-RA Steroid CYP90D1 medium borderline
PITA_000001039-RA Steroid DET2 medium pass
PITA_000032417-RA Steroid DET2 medium pass
PITA_000038393-RA Steroid DET2 medium pass
PITA_000038394-RA Steroid DET2 medium pass
PITA_000038395-RA Steroid DET2 medium pass
PITA_000039706-RA Steroid DET2 medium pass
PITA_000045469-RA Steroid DET2 low borderline