PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

6129
Candidate Protein Records
5262
Pathway-Level Records
12692
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
Reset
Protein/Isoform Record Pathway Family Confidence Status
PITA_000013490-RA Terpenoid CYP76 medium pass
PITA_000013707-RA Terpenoid CYP76 low borderline
PITA_000014937-RA Terpenoid CYP76 medium pass
PITA_000014939-RA Terpenoid CYP76 low borderline
PITA_000015505-RA Terpenoid CYP76 low borderline
PITA_000015506-RA Terpenoid CYP76 medium pass
PITA_000015650-RA Terpenoid CYP76 medium pass
PITA_000016126-RA Terpenoid CYP76 medium pass
PITA_000016127-RA Terpenoid CYP76 medium pass
PITA_000016134-RA Terpenoid CYP76 low borderline
PITA_000016203-RA Terpenoid CYP76 low borderline
PITA_000018199-RA Terpenoid CYP76 low borderline
PITA_000019010-RA Terpenoid CYP76 low borderline
PITA_000019040-RA Terpenoid CYP76 medium pass
PITA_000019042-RA Terpenoid CYP76 low borderline
PITA_000019446-RA Terpenoid CYP76 medium pass
PITA_000019693-RA Terpenoid CYP76 medium borderline
PITA_000020244-RA Terpenoid CYP76 low borderline
PITA_000021158-RA Terpenoid CYP76 low borderline
PITA_000022034-RA Terpenoid CYP76 medium pass
PITA_000022231-RA Terpenoid CYP76 medium borderline
PITA_000022232-RA Terpenoid CYP76 medium borderline
PITA_000022455-RA Terpenoid CYP76 medium borderline
PITA_000022456-RA Terpenoid CYP76 medium borderline
PITA_000023051-RA Terpenoid CYP76 low borderline
PITA_000023275-RA Terpenoid CYP76 medium pass
PITA_000023499-RA Terpenoid CYP76 medium borderline
PITA_000023806-RA Terpenoid CYP76 medium borderline
PITA_000023807-RA Terpenoid CYP76 low borderline
PITA_000023808-RA Terpenoid CYP76 medium borderline
PITA_000024089-RA Terpenoid CYP76 medium pass
PITA_000024090-RA Terpenoid CYP76 medium borderline
PITA_000024091-RA Terpenoid CYP76 medium borderline
PITA_000024104-RA Terpenoid CYP76 medium pass
PITA_000024813-RA Terpenoid CYP76 medium borderline
PITA_000024905-RA Terpenoid CYP76 medium pass
PITA_000025276-RA Terpenoid CYP76 low borderline
PITA_000025412-RA Terpenoid CYP76 medium borderline
PITA_000025415-RA Terpenoid CYP76 low borderline
PITA_000025722-RA Terpenoid CYP76 medium borderline
PITA_000025817-RA Terpenoid CYP76 medium pass
PITA_000025821-RA Terpenoid CYP76 low borderline
PITA_000025906-RA Terpenoid CYP76 medium pass
PITA_000025907-RA Terpenoid CYP76 medium borderline
PITA_000027035-RA Terpenoid CYP76 low borderline
PITA_000027160-RA Terpenoid CYP76 low borderline
PITA_000027632-RA Terpenoid CYP76 low borderline
PITA_000027819-RA Terpenoid CYP76 medium borderline
PITA_000028219-RA Terpenoid CYP76 medium pass
PITA_000028221-RA Terpenoid CYP76 medium borderline