PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

6129
Candidate Protein Records
5262
Pathway-Level Records
12692
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status Best Target
PITA_000021157-RA Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
PITA_000023153-RA Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
PITA_000023611-RA Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
PITA_000025182-RA Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
PITA_000025302-RA Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
PITA_000025947-RA Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
PITA_000025948-RA Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
PITA_000026379-RA Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
PITA_000026380-RA Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
PITA_000026467-RA Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
PITA_000026994-RA Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
PITA_000028396-RA Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
PITA_000028398-RA Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
PITA_000028782-RA Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
PITA_000029191-RA Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
PITA_000029370-RA Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
PITA_000029371-RA Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
PITA_000029572-RA Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
PITA_000030323-RA Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
PITA_000031066-RA Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
PITA_000031611-RA Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
PITA_000031627-RA Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
PITA_000032042-RA Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
PITA_000034070-RA Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
PITA_000034775-RA Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
PITA_000035028-RA Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
PITA_000035029-RA Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
PITA_000036259-RA Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
PITA_000036450-RA Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
PITA_000037786-RA Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
PITA_000037965-RA Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
PITA_000038868-RA Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
PITA_000039466-RA Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
PITA_000040182-RA Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
PITA_000041718-RA Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
PITA_000042797-RA Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
PITA_000044091-RA Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
PITA_000045041-RA Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
PITA_000045042-RA Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
PITA_000045833-RA Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
PITA_000046003-RA Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
PITA_000047171-RA Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
PITA_000047399-RA Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
PITA_000047883-RA Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
PITA_000048844-RA Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
PITA_000050772-RA Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
PITA_000051190-RA Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
PITA_000051832-RA Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
PITA_000053768-RA Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
PITA_000054013-RA Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH