PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

6129
Candidate Protein Records
5262
Pathway-Level Records
12692
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Protein/Isoform Record Pathway Family Confidence Status Best Target
PITA_000039216-RA Terpenoid CYP76 medium pass CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
PITA_000039712-RA Terpenoid CYP76 medium borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
PITA_000040187-RA Terpenoid CYP76 medium borderline CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU
PITA_000041890-RA Terpenoid CYP76 medium borderline CYP76__00004__sp_A0A0Y0GRS3_C76H3_SALMI
PITA_000041936-RA Terpenoid CYP76 medium pass CYP76__00025__sp_W8JIS5_IO_CATRO
PITA_000042162-RA Terpenoid CYP76 medium pass CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU
PITA_000042245-RA Terpenoid CYP76 low borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
PITA_000042435-RA Terpenoid CYP76 low borderline CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC
PITA_000044227-RA Terpenoid CYP76 medium pass CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU
PITA_000044249-RA Terpenoid CYP76 medium pass CYP76__00023__sp_S4UX02_CYPH1_SALMI
PITA_000044925-RA Terpenoid CYP76 medium pass CYP76__00019__sp_Q6YTF1_C76M8_ORYSJ
PITA_000044926-RA Terpenoid CYP76 medium pass CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
PITA_000045152-RA Terpenoid CYP76 medium borderline CYP76__00013__sp_D1MI46_C76BA_SWEMU
PITA_000045298-RA Terpenoid CYP76 medium pass CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
PITA_000045701-RA Terpenoid CYP76 low borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
PITA_000046083-RA Terpenoid CYP76 medium borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
PITA_000046305-RA Terpenoid CYP76 medium pass CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC
PITA_000046345-RA Terpenoid CYP76 medium pass CYP76__00025__sp_W8JIS5_IO_CATRO
PITA_000046584-RA Terpenoid CYP76 medium pass CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
PITA_000046792-RA Terpenoid CYP76 medium pass CYP76__00004__sp_A0A0Y0GRS3_C76H3_SALMI
PITA_000047036-RA Terpenoid CYP76 medium borderline CYP76__00014__sp_I3PFJ5_C76AD_BETVU
PITA_000047521-RA Terpenoid CYP76 medium borderline CYP76__00024__sp_W0FKI0_DOX1_PERHD
PITA_000047962-RA Terpenoid CYP76 low borderline CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU
PITA_000048213-RA Terpenoid CYP76 medium pass CYP76__00013__sp_D1MI46_C76BA_SWEMU
PITA_000048309-RA Terpenoid CYP76 low borderline CYP76__00013__sp_D1MI46_C76BA_SWEMU
PITA_000048611-RA Terpenoid CYP76 low borderline CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
PITA_000048612-RA Terpenoid CYP76 medium pass CYP76__00013__sp_D1MI46_C76BA_SWEMU
PITA_000048760-RA Terpenoid CYP76 medium pass CYP76__00023__sp_S4UX02_CYPH1_SALMI
PITA_000049421-RA Terpenoid CYP76 medium pass CYP76__00020__sp_Q6YTF5_C76M5_ORYSJ
PITA_000049425-RA Terpenoid CYP76 medium pass CYP76__00016__sp_P0DXJ6_C7631_LOPWI
PITA_000050040-RA Terpenoid CYP76 medium pass CYP76__00024__sp_W0FKI0_DOX1_PERHD
PITA_000050286-RA Terpenoid CYP76 medium borderline CYP76__00019__sp_Q6YTF1_C76M8_ORYSJ
PITA_000050799-RA Terpenoid CYP76 medium pass CYP76__00025__sp_W8JIS5_IO_CATRO
PITA_000050800-RA Terpenoid CYP76 medium borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
PITA_000051065-RA Terpenoid CYP76 medium pass CYP76__00021__sp_Q6Z5I7_C76M6_ORYSJ
PITA_000051216-RA Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
PITA_000051298-RA Terpenoid CYP76 low borderline CYP76__00025__sp_W8JIS5_IO_CATRO
PITA_000051299-RA Terpenoid CYP76 low borderline CYP76__00013__sp_D1MI46_C76BA_SWEMU
PITA_000051406-RA Terpenoid CYP76 medium borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
PITA_000051433-RA Terpenoid CYP76 medium pass CYP76__00025__sp_W8JIS5_IO_CATRO
PITA_000051437-RA Terpenoid CYP76 low borderline CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
PITA_000051675-RA Terpenoid CYP76 medium borderline CYP76__00013__sp_D1MI46_C76BA_SWEMU
PITA_000051869-RA Terpenoid CYP76 medium borderline CYP76__00013__sp_D1MI46_C76BA_SWEMU
PITA_000052144-RA Terpenoid CYP76 low borderline CYP76__00017__sp_Q14T82_C76B9_PETHY
PITA_000052204-RA Terpenoid CYP76 low borderline CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU
PITA_000052275-RA Terpenoid CYP76 medium pass CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
PITA_000052929-RA Terpenoid CYP76 medium borderline CYP76__00023__sp_S4UX02_CYPH1_SALMI
PITA_000052955-RA Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
PITA_000053114-RA Terpenoid CYP76 medium borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
PITA_000053186-RA Terpenoid CYP76 medium pass CYP76__00013__sp_D1MI46_C76BA_SWEMU