PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

6129
Candidate Protein Records
5262
Pathway-Level Records
12692
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
PITA_000086373-RA Phenylpropanoid C4H/CYP73A low borderline
PITA_000087793-RA Phenylpropanoid C4H/CYP73A low borderline
PITA_000088153-RA Phenylpropanoid C4H/CYP73A low borderline
PITA_000089082-RA Phenylpropanoid C4H/CYP73A low borderline
PITA_000089206-RA Phenylpropanoid C4H/CYP73A low borderline
PITA_000089385-RA Phenylpropanoid C4H/CYP73A low borderline
PITA_000091262-RA Phenylpropanoid C4H/CYP73A low borderline
PITA_000091299-RA Phenylpropanoid C4H/CYP73A low borderline
PITA_000092288-RA Phenylpropanoid C4H/CYP73A low borderline
PITA_000092869-RA Phenylpropanoid C4H/CYP73A low borderline
PITA_000093021-RA Phenylpropanoid C4H/CYP73A low borderline
PITA_000093519-RA Phenylpropanoid C4H/CYP73A low borderline
PITA_000094185-RA Phenylpropanoid C4H/CYP73A low borderline
PITA_000094202-RA Phenylpropanoid C4H/CYP73A low borderline
PITA_000094261-RA Phenylpropanoid C4H/CYP73A low borderline
PITA_000094696-RA Phenylpropanoid C4H/CYP73A low borderline
PITA_000094808-RA Phenylpropanoid C4H/CYP73A low borderline
PITA_000095072-RA Phenylpropanoid C4H/CYP73A low borderline
PITA_000095405-RA Phenylpropanoid C4H/CYP73A low borderline
PITA_000095733-RA Phenylpropanoid C4H/CYP73A low borderline
1A_all_VO_L_2_T_35041/51331|m.1265.mrna1 Phenylpropanoid CAD medium borderline
1A_all_VO_L_2_T_4417/51331|m.1073.mrna1 Phenylpropanoid CAD medium borderline
6A_all_NT_comp98769_c1_seq9|m.51850.mrna1 Phenylpropanoid CAD low borderline
PITA_000000411-RA Phenylpropanoid CAD medium pass
PITA_000000412-RA Phenylpropanoid CAD medium pass
PITA_000000413-RA Phenylpropanoid CAD low borderline
PITA_000000444-RA Phenylpropanoid CAD medium pass
PITA_000000451-RA Phenylpropanoid CAD medium pass
PITA_000000642-RA Phenylpropanoid CAD medium pass
PITA_000000847-RA Phenylpropanoid CAD medium pass
PITA_000000848-RA Phenylpropanoid CAD low borderline
PITA_000001400-RA Phenylpropanoid CAD low borderline
PITA_000001401-RA Phenylpropanoid CAD low borderline
PITA_000001529-RA Phenylpropanoid CAD medium pass
PITA_000001844-RA Phenylpropanoid CAD medium pass
PITA_000001900-RA Phenylpropanoid CAD low borderline
PITA_000002172-RA Phenylpropanoid CAD medium pass
PITA_000002173-RA Phenylpropanoid CAD low borderline
PITA_000002810-RA Phenylpropanoid CAD low borderline
PITA_000003108-RA Phenylpropanoid CAD medium borderline
PITA_000003415-RA Phenylpropanoid CAD medium pass
PITA_000003837-RA Phenylpropanoid CAD low borderline
PITA_000004052-RA Phenylpropanoid CAD medium pass
PITA_000004191-RA Phenylpropanoid CAD low borderline
PITA_000004192-RA Phenylpropanoid CAD low borderline
PITA_000004762-RA Phenylpropanoid CAD low borderline
PITA_000006222-RA Phenylpropanoid CAD medium borderline
PITA_000008068-RA Phenylpropanoid CAD low borderline
PITA_000009657-RA Phenylpropanoid CAD medium pass
PITA_000009688-RA Phenylpropanoid CAD low borderline