PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

6129
Candidate Protein Records
5262
Pathway-Level Records
12692
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
Reset
Protein/Isoform Record Pathway Family Confidence Status
PITA_000010668-RA Flavonoid F3H medium borderline
PITA_000011975-RA Flavonoid F3H medium borderline
PITA_000011998-RA Flavonoid F3H low borderline
PITA_000012007-RA Flavonoid F3H medium borderline
PITA_000012008-RA Flavonoid F3H medium borderline
PITA_000012624-RA Flavonoid F3H medium borderline
PITA_000012625-RA Flavonoid F3H medium borderline
PITA_000014194-RA Flavonoid F3H medium borderline
PITA_000014195-RA Flavonoid F3H medium pass
PITA_000014389-RA Flavonoid F3H low borderline
PITA_000014783-RA Flavonoid F3H medium borderline
PITA_000014784-RA Flavonoid F3H medium borderline
PITA_000015930-RA Flavonoid F3H medium borderline
PITA_000015934-RA Flavonoid F3H medium borderline
PITA_000015938-RA Flavonoid F3H medium borderline
PITA_000016145-RA Flavonoid F3H medium borderline
PITA_000016528-RA Flavonoid F3H medium borderline
PITA_000016689-RA Flavonoid F3H medium borderline
PITA_000016690-RA Flavonoid F3H medium pass
PITA_000016691-RA Flavonoid F3H medium borderline
PITA_000016929-RA Flavonoid F3H medium pass
PITA_000016930-RA Flavonoid F3H medium borderline
PITA_000017254-RA Flavonoid F3H medium borderline
PITA_000017891-RA Flavonoid F3H medium borderline
PITA_000019901-RA Flavonoid F3H low borderline
PITA_000020024-RA Flavonoid F3H medium borderline
PITA_000020113-RA Flavonoid F3H medium borderline
PITA_000020114-RA Flavonoid F3H medium borderline
PITA_000020402-RA Flavonoid F3H low borderline
PITA_000020605-RA Flavonoid F3H medium borderline
PITA_000021167-RA Flavonoid F3H medium borderline
PITA_000021821-RA Flavonoid F3H medium borderline
PITA_000021824-RA Flavonoid F3H medium borderline
PITA_000022227-RA Flavonoid F3H medium pass
PITA_000022352-RA Flavonoid F3H medium borderline
PITA_000023239-RA Flavonoid F3H medium borderline
PITA_000023281-RA Flavonoid F3H medium borderline
PITA_000023428-RA Flavonoid F3H low borderline
PITA_000024381-RA Flavonoid F3H medium borderline
PITA_000024382-RA Flavonoid F3H low borderline
PITA_000024505-RA Flavonoid F3H medium borderline
PITA_000024679-RA Flavonoid F3H low borderline
PITA_000024768-RA Flavonoid F3H medium pass
PITA_000024799-RA Flavonoid F3H medium borderline
PITA_000024800-RA Flavonoid F3H medium borderline
PITA_000025161-RA Flavonoid F3H medium pass
PITA_000025163-RA Flavonoid F3H medium borderline
PITA_000025166-RA Flavonoid F3H medium borderline
PITA_000025205-RA Flavonoid F3H medium borderline
PITA_000025702-RA Flavonoid F3H medium borderline