PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

6129
Candidate Protein Records
5262
Pathway-Level Records
12692
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Protein/Isoform Record Pathway Family Confidence Status
PITA_000059370-RA Steroid SMT1/SMT2/SMT3 low borderline
PITA_000061660-RA Steroid SMT1/SMT2/SMT3 medium pass
PITA_000061930-RA Steroid SMT1/SMT2/SMT3 medium pass
PITA_000062104-RA Steroid SMT1/SMT2/SMT3 low borderline
PITA_000064703-RA Steroid SMT1/SMT2/SMT3 medium pass
PITA_000064969-RA Steroid SMT1/SMT2/SMT3 low borderline
PITA_000067719-RA Steroid SMT1/SMT2/SMT3 low borderline
PITA_000067778-RA Steroid SMT1/SMT2/SMT3 low borderline
PITA_000069385-RA Steroid SMT1/SMT2/SMT3 low borderline
PITA_000070801-RA Steroid SMT1/SMT2/SMT3 medium pass
PITA_000071343-RA Steroid SMT1/SMT2/SMT3 low borderline
PITA_000072028-RA Steroid SMT1/SMT2/SMT3 medium pass
PITA_000072029-RA Steroid SMT1/SMT2/SMT3 medium pass
PITA_000074114-RA Steroid SMT1/SMT2/SMT3 medium pass
PITA_000077270-RA Steroid SMT1/SMT2/SMT3 medium pass
PITA_000077776-RA Steroid SMT1/SMT2/SMT3 low borderline
PITA_000078387-RA Steroid SMT1/SMT2/SMT3 medium pass
PITA_000079071-RA Steroid SMT1/SMT2/SMT3 medium pass
PITA_000080615-RA Steroid SMT1/SMT2/SMT3 low borderline
PITA_000080973-RA Steroid SMT1/SMT2/SMT3 medium pass
PITA_000081310-RA Steroid SMT1/SMT2/SMT3 medium pass
PITA_000082066-RA Steroid SMT1/SMT2/SMT3 medium pass
PITA_000083951-RA Steroid SMT1/SMT2/SMT3 medium pass
PITA_000084581-RA Steroid SMT1/SMT2/SMT3 low borderline
PITA_000085124-RA Steroid SMT1/SMT2/SMT3 low borderline
PITA_000085135-RA Steroid SMT1/SMT2/SMT3 low borderline
PITA_000085179-RA Steroid SMT1/SMT2/SMT3 medium pass
PITA_000085925-RA Steroid SMT1/SMT2/SMT3 medium pass
PITA_000088152-RA Steroid SMT1/SMT2/SMT3 low borderline
PITA_000088158-RA Steroid SMT1/SMT2/SMT3 low borderline
PITA_000088828-RA Steroid SMT1/SMT2/SMT3 medium pass
PITA_000092769-RA Steroid SMT1/SMT2/SMT3 low borderline
PITA_000093053-RA Steroid SMT1/SMT2/SMT3 low borderline
PITA_000095436-RA Steroid SMT1/SMT2/SMT3 low borderline
PITA_000095610-RA Steroid SMT1/SMT2/SMT3 low borderline
PITA_000095842-RA Steroid SMT1/SMT2/SMT3 low borderline
PITA_000095991-RA Steroid SMT1/SMT2/SMT3 medium pass
PITAhm_000070-RA Steroid SMT1/SMT2/SMT3 low borderline
PITAhm_001300-RA Steroid SMT1/SMT2/SMT3 medium pass
PITAhm_001833-RA Steroid SMT1/SMT2/SMT3 low borderline
PITAhm_002518-RA Steroid SMT1/SMT2/SMT3 medium pass
PITAhm_002943-RA Steroid SMT1/SMT2/SMT3 low borderline
PITA_000009606-RA Steroid SQE low borderline
PITA_000055112-RA Steroid SQE low borderline
PITA_000059364-RA Steroid SQE medium pass
PITA_000084147-RA Steroid SQE medium pass
PITA_000002541-RA Steroid SQS/FDFT1 medium pass
PITA_000043539-RA Steroid SQS/FDFT1 medium pass
PITA_000044963-RA Steroid SQS/FDFT1 low borderline
PITA_000050116-RA Steroid SQS/FDFT1 medium pass