PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

6129
Candidate Protein Records
5262
Pathway-Level Records
12692
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
PITA_000094616-RA Flavonoid F3H medium pass
PITA_000095423-RA Flavonoid F3H low borderline
PITA_000095739-RA Flavonoid F3H medium borderline
PITA_000096232-RA Flavonoid F3H low borderline
PITA_000096356-RA Flavonoid F3H medium borderline
PITAhm_000428-RA Flavonoid F3H medium borderline
PITAhm_000611-RA Flavonoid F3H medium borderline
PITAhm_000756-RA Flavonoid F3H medium borderline
PITAhm_000888-RA Flavonoid F3H medium borderline
PITAhm_000940-RA Flavonoid F3H medium borderline
PITAhm_001891-RA Flavonoid F3H medium borderline
PITAhm_002085-RA Flavonoid F3H low borderline
PITAhm_002678-RA Flavonoid F3H medium borderline
PITAhm_002821-RA Flavonoid F3H medium borderline
PITAhm_003069-RA Flavonoid F3H medium borderline
PITAhm_003188-RA Flavonoid F3H medium borderline
3A_I20_NT_comp26092_c0_seq1|m.35935.mrna1 Flavonoid FLS medium borderline
PITA_000004087-RA Flavonoid FLS low borderline
PITA_000027993-RA Flavonoid FLS medium pass
PITA_000029882-RA Flavonoid FLS medium borderline
PITA_000034864-RA Flavonoid FLS medium borderline
PITA_000036797-RA Flavonoid FLS medium borderline
PITA_000054229-RA Flavonoid FLS medium borderline
PITA_000057400-RA Flavonoid FLS medium pass
PITA_000060615-RA Flavonoid FLS medium borderline
PITA_000075244-RA Flavonoid FLS medium borderline
PITA_000075500-RA Flavonoid FLS medium pass
PITA_000075821-RA Flavonoid FLS medium pass
PITA_000077708-RA Flavonoid FLS medium borderline
PITA_000087646-RA Flavonoid FLS medium pass
PITA_000089665-RA Flavonoid FLS medium borderline
PITA_000000461-RA Flavonoid FNS medium borderline
PITA_000000462-RA Flavonoid FNS medium borderline
PITA_000000609-RA Flavonoid FNS medium borderline
PITA_000002318-RA Flavonoid FNS low borderline
PITA_000004009-RA Flavonoid FNS medium borderline
PITA_000004396-RA Flavonoid FNS medium borderline
PITA_000005876-RA Flavonoid FNS medium borderline
PITA_000007756-RA Flavonoid FNS medium borderline
PITA_000008695-RA Flavonoid FNS medium borderline
PITA_000010256-RA Flavonoid FNS medium borderline
PITA_000010362-RA Flavonoid FNS medium borderline
PITA_000011385-RA Flavonoid FNS medium borderline
PITA_000013707-RA Flavonoid FNS medium borderline
PITA_000018199-RA Flavonoid FNS medium borderline
PITA_000020245-RA Flavonoid FNS medium borderline
PITA_000025735-RA Flavonoid FNS medium borderline
PITA_000025821-RA Flavonoid FNS medium borderline
PITA_000027035-RA Flavonoid FNS medium borderline
PITA_000027160-RA Flavonoid FNS medium borderline