PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

6129
Candidate Protein Records
5262
Pathway-Level Records
12692
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
PITA_000087769-RA Phenylpropanoid CCR medium pass
PITA_000092907-RA Phenylpropanoid CCR medium borderline
PITA_000094177-RA Phenylpropanoid CCR low borderline
PITA_000095393-RA Phenylpropanoid CCR medium pass
PITA_000095976-RA Phenylpropanoid CCR low borderline
PITAhm_001141-RA Phenylpropanoid CCR medium pass
PITAhm_003329-RA Phenylpropanoid CCR medium borderline
PITA_000013272-RA Phenylpropanoid CCoAOMT low borderline
PITA_000013277-RA Phenylpropanoid CCoAOMT medium pass
PITA_000020679-RA Phenylpropanoid CCoAOMT medium pass
PITA_000022350-RA Phenylpropanoid CCoAOMT low borderline
PITA_000025460-RA Phenylpropanoid CCoAOMT low borderline
PITA_000029037-RA Phenylpropanoid CCoAOMT medium pass
PITA_000046742-RA Phenylpropanoid CCoAOMT medium pass
PITA_000046743-RA Phenylpropanoid CCoAOMT medium pass
PITA_000046744-RA Phenylpropanoid CCoAOMT medium pass
PITA_000047555-RA Phenylpropanoid CCoAOMT low borderline
PITA_000048944-RA Phenylpropanoid CCoAOMT medium pass
PITA_000057738-RA Phenylpropanoid CCoAOMT medium pass
PITA_000059075-RA Phenylpropanoid CCoAOMT medium pass
PITA_000068662-RA Phenylpropanoid CCoAOMT low borderline
PITA_000089707-RA Phenylpropanoid CCoAOMT medium pass
PITA_000091591-RA Phenylpropanoid CCoAOMT medium pass
PITA_000096367-RA Phenylpropanoid CCoAOMT medium pass
PITAhm_000440-RA Phenylpropanoid CCoAOMT medium pass
PITA_000000047-RA Phenylpropanoid COMT medium pass
PITA_000000285-RA Phenylpropanoid COMT medium pass
PITA_000003103-RA Phenylpropanoid COMT medium pass
PITA_000003507-RA Phenylpropanoid COMT medium pass
PITA_000004376-RA Phenylpropanoid COMT low borderline
PITA_000005315-RA Phenylpropanoid COMT low borderline
PITA_000007137-RA Phenylpropanoid COMT medium pass
PITA_000007852-RA Phenylpropanoid COMT low borderline
PITA_000010263-RA Phenylpropanoid COMT medium pass
PITA_000011008-RA Phenylpropanoid COMT medium pass
PITA_000015038-RA Phenylpropanoid COMT medium pass
PITA_000015045-RA Phenylpropanoid COMT medium pass
PITA_000015702-RA Phenylpropanoid COMT medium pass
PITA_000017881-RA Phenylpropanoid COMT medium pass
PITA_000019184-RA Phenylpropanoid COMT low borderline
PITA_000021438-RA Phenylpropanoid COMT low borderline
PITA_000021439-RA Phenylpropanoid COMT low borderline
PITA_000021792-RA Phenylpropanoid COMT low borderline
PITA_000021793-RA Phenylpropanoid COMT low borderline
PITA_000021794-RA Phenylpropanoid COMT low borderline
PITA_000021955-RA Phenylpropanoid COMT medium pass
PITA_000022625-RA Phenylpropanoid COMT low borderline
PITA_000025014-RA Phenylpropanoid COMT medium pass
PITA_000026540-RA Phenylpropanoid COMT medium pass
PITA_000026542-RA Phenylpropanoid COMT medium pass