PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

6129
Candidate Protein Records
5262
Pathway-Level Records
12692
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
PITA_000070468-RA Terpenoid HMGR medium pass
PITA_000070840-RA Terpenoid HMGR medium pass
PITA_000073615-RA Terpenoid HMGR medium pass
PITA_000074353-RA Terpenoid HMGR low borderline
PITA_000075128-RA Terpenoid HMGR low borderline
PITA_000075501-RA Terpenoid HMGR medium pass
PITA_000075502-RA Terpenoid HMGR medium pass
PITA_000076153-RA Terpenoid HMGR low borderline
PITA_000077745-RA Terpenoid HMGR low borderline
PITA_000077746-RA Terpenoid HMGR medium pass
PITA_000079084-RA Terpenoid HMGR medium pass
PITA_000079634-RA Terpenoid HMGR medium pass
PITA_000084749-RA Terpenoid HMGR medium pass
PITA_000084825-RA Terpenoid HMGR medium pass
PITA_000085787-RA Terpenoid HMGR medium pass
PITA_000086097-RA Terpenoid HMGR medium pass
PITA_000086098-RA Terpenoid HMGR medium pass
PITA_000086488-RA Terpenoid HMGR medium pass
PITA_000086751-RA Terpenoid HMGR medium pass
PITA_000087873-RA Terpenoid HMGR medium pass
PITA_000089579-RA Terpenoid HMGR medium pass
PITA_000089588-RA Terpenoid HMGR low borderline
PITA_000090122-RA Terpenoid HMGR medium pass
PITA_000090484-RA Terpenoid HMGR medium pass
PITA_000091169-RA Terpenoid HMGR medium pass
PITA_000093096-RA Terpenoid HMGR medium pass
PITA_000093429-RA Terpenoid HMGR medium pass
PITA_000093592-RA Terpenoid HMGR medium pass
PITA_000094527-RA Terpenoid HMGR medium pass
PITAhm_000064-RA Terpenoid HMGR medium pass
PITAhm_002628-RA Terpenoid HMGR medium pass
PITA_000029906-RA Terpenoid HMGS medium pass
PITA_000040020-RA Terpenoid HMGS high pass
PITAhm_002675-RA Terpenoid HMGS high pass
PITA_000014318-RA Terpenoid IDI low borderline
PITA_000024357-RA Terpenoid IDI low borderline
PITA_000029525-RA Terpenoid IDI low borderline
PITA_000029527-RA Terpenoid IDI medium pass
PITA_000029529-RA Terpenoid IDI low borderline
PITA_000036963-RA Terpenoid IDI low borderline
PITA_000071142-RA Terpenoid IDI medium pass
PITA_000071143-RA Terpenoid IDI medium pass
PITA_000082164-RA Terpenoid IDI low borderline
PITA_000002338-RA Terpenoid MCT/IspD high pass
PITA_000070150-RA Terpenoid MDS/IspF high pass
PITA_000077699-RA Terpenoid MDS/IspF medium pass
PITA_000031868-RA Terpenoid MVD low borderline
PITA_000031869-RA Terpenoid MVD low borderline
PITA_000038735-RA Terpenoid MVD medium pass
PITA_000002328-RA Terpenoid MVK low borderline