PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

6129
Candidate Protein Records
5262
Pathway-Level Records
12692
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
PITA_000015253-RA Terpenoid TPS medium pass
PITA_000016076-RA Terpenoid TPS medium pass
PITA_000016104-RA Terpenoid TPS medium pass
PITA_000016648-RA Terpenoid TPS low borderline
PITA_000016649-RA Terpenoid TPS medium pass
PITA_000016650-RA Terpenoid TPS medium pass
PITA_000016917-RA Terpenoid TPS medium pass
PITA_000016918-RA Terpenoid TPS medium pass
PITA_000017108-RA Terpenoid TPS low borderline
PITA_000018643-RA Terpenoid TPS medium pass
PITA_000018694-RA Terpenoid TPS medium pass
PITA_000018774-RA Terpenoid TPS medium pass
PITA_000018808-RA Terpenoid TPS medium pass
PITA_000019686-RA Terpenoid TPS medium pass
PITA_000019687-RA Terpenoid TPS low borderline
PITA_000019690-RA Terpenoid TPS medium pass
PITA_000020636-RA Terpenoid TPS medium pass
PITA_000020638-RA Terpenoid TPS low borderline
PITA_000020640-RA Terpenoid TPS medium pass
PITA_000020916-RA Terpenoid TPS medium pass
PITA_000020917-RA Terpenoid TPS medium pass
PITA_000020970-RA Terpenoid TPS medium pass
PITA_000021128-RA Terpenoid TPS medium pass
PITA_000021129-RA Terpenoid TPS medium pass
PITA_000021130-RA Terpenoid TPS medium pass
PITA_000021153-RA Terpenoid TPS medium pass
PITA_000022113-RA Terpenoid TPS medium pass
PITA_000022114-RA Terpenoid TPS medium pass
PITA_000022125-RA Terpenoid TPS medium pass
PITA_000022126-RA Terpenoid TPS low borderline
PITA_000022127-RA Terpenoid TPS medium pass
PITA_000022460-RA Terpenoid TPS medium pass
PITA_000022845-RA Terpenoid TPS medium pass
PITA_000022926-RA Terpenoid TPS medium pass
PITA_000024010-RA Terpenoid TPS medium pass
PITA_000026247-RA Terpenoid TPS medium pass
PITA_000026248-RA Terpenoid TPS low borderline
PITA_000026353-RA Terpenoid TPS medium pass
PITA_000027509-RA Terpenoid TPS medium pass
PITA_000027510-RA Terpenoid TPS low borderline
PITA_000027511-RA Terpenoid TPS medium pass
PITA_000027512-RA Terpenoid TPS medium pass
PITA_000027513-RA Terpenoid TPS low borderline
PITA_000027825-RA Terpenoid TPS medium pass
PITA_000027826-RA Terpenoid TPS medium pass
PITA_000028107-RA Terpenoid TPS medium pass
PITA_000028108-RA Terpenoid TPS medium pass
PITA_000028590-RA Terpenoid TPS medium pass
PITA_000028624-RA Terpenoid TPS medium pass
PITA_000028918-RA Terpenoid TPS medium pass