PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

5262
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
PITA_000029980-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000030629-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000030719-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000032119-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000032652-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000032929-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000032932-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000033973-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000034158-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000034704-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000036023-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000036291-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000037316-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000038593-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000038706-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000038893-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000040630-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000043159-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000043510-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000043621-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000044847-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000044926-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000045701-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000046083-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000046792-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000047087-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000047521-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000047526-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000047962-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000048237-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000048238-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000049425-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000050040-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000050286-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000050489-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000050525-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000050799-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000051239-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000051433-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000051675-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000054344-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000054409-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000054791-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000055788-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000055813-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000057181-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000057353-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000057462-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000057574-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000057948-RA Steroid BR6OX2/CYP85A2 low borderline