PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

6129
Candidate Protein Records
5262
Pathway-Level Records
12692
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Protein/Isoform Record Pathway Family Confidence Status Best Target
PITA_000090718-RA Terpenoid TPS medium pass TPS__00015__sp_A0A1L6Z3A5_TPS5_PSEAD
PITA_000091188-RA Terpenoid TPS medium pass TPS__00146__sp_M4HYC8_MPIM1_PINCO
PITA_000091516-RA Terpenoid TPS medium pass TPS__00146__sp_M4HYC8_MPIM1_PINCO
PITA_000092419-RA Terpenoid TPS medium pass TPS__00015__sp_A0A1L6Z3A5_TPS5_PSEAD
PITA_000092527-RA Terpenoid TPS medium pass TPS__00099__sp_F2XF97_AHUMS_PICGL
PITA_000092929-RA Terpenoid TPS medium pass TPS__00015__sp_A0A1L6Z3A5_TPS5_PSEAD
PITA_000092953-RA Terpenoid TPS medium pass TPS__00015__sp_A0A1L6Z3A5_TPS5_PSEAD
PITA_000093114-RA Terpenoid TPS medium pass TPS__00099__sp_F2XF97_AHUMS_PICGL
PITA_000093367-RA Terpenoid TPS medium pass TPS__00099__sp_F2XF97_AHUMS_PICGL
PITA_000093399-RA Terpenoid TPS medium pass TPS__00101__sp_F2XF99_FARNS_PICXS
PITA_000093604-RA Terpenoid TPS medium pass TPS__00015__sp_A0A1L6Z3A5_TPS5_PSEAD
PITA_000094270-RA Terpenoid TPS medium pass TPS__00015__sp_A0A1L6Z3A5_TPS5_PSEAD
PITA_000094385-RA Terpenoid TPS medium pass TPS__00099__sp_F2XF97_AHUMS_PICGL
PITA_000094405-RA Terpenoid TPS medium pass TPS__00068__sp_C0PPM5_ALGPS_PICSI
PITA_000094406-RA Terpenoid TPS medium pass TPS__00068__sp_C0PPM5_ALGPS_PICSI
PITA_000094451-RA Terpenoid TPS medium pass TPS__00099__sp_F2XF97_AHUMS_PICGL
PITA_000095064-RA Terpenoid TPS medium pass TPS__00099__sp_F2XF97_AHUMS_PICGL
PITA_000095208-RA Terpenoid TPS medium pass TPS__00068__sp_C0PPM5_ALGPS_PICSI
PITA_000095826-RA Terpenoid TPS medium pass TPS__00015__sp_A0A1L6Z3A5_TPS5_PSEAD
PITA_000095853-RA Terpenoid TPS medium pass TPS__00175__sp_R9QMQ9_SBPN1_PINCO
PITA_000095919-RA Terpenoid TPS medium pass TPS__00015__sp_A0A1L6Z3A5_TPS5_PSEAD
PITA_000096332-RA Terpenoid TPS medium pass TPS__00069__sp_C0PPR1_LLOS2_PICSI
PITA_000096722-RA Terpenoid TPS medium pass TPS__00015__sp_A0A1L6Z3A5_TPS5_PSEAD
PITAhm_000380-RA Terpenoid TPS medium pass TPS__00101__sp_F2XF99_FARNS_PICXS
PITAhm_000547-RA Terpenoid TPS medium pass TPS__00175__sp_R9QMQ9_SBPN1_PINCO
PITAhm_000685-RA Terpenoid TPS medium pass TPS__00141__sp_M4HXU6_TPSD1_PINBN
PITAhm_001074-RA Terpenoid TPS medium pass TPS__00099__sp_F2XF97_AHUMS_PICGL
PITAhm_002515-RA Terpenoid TPS medium pass TPS__00107__sp_F2XFA6_LLOS1_PICSI
1A_I11_NT_comp49445_c0_seq3|m.4479.mrna1 Terpenoid UGT medium pass UGT__00103__sp_Q9M156_U72B1_ARATH
1A_I3_NT_comp53258_c0_seq2|m.6566.mrna2 Terpenoid UGT medium pass UGT__00068__sp_P0DO75_GT752_SIRGR
1A_I9_VO_L_2122_T_92/101|m.12450.mrna1 Terpenoid UGT medium pass UGT__00102__sp_Q9LZD8_U89A2_ARATH
1A_all_VO_L_10621_T_8/20|m.2398.mrna1 Terpenoid UGT medium pass UGT__00075__sp_Q7Y232_U73B4_ARATH
1A_all_VO_L_5517_T_887/930|m.2020.mrna1 Terpenoid UGT medium pass UGT__00101__sp_Q9LVR1_U72E2_ARATH
2A_I4_VO_L_831_T_41/65|m.26747.mrna1 Terpenoid UGT medium pass UGT__00075__sp_Q7Y232_U73B4_ARATH
3A_I19_VO_L_1_T_135982/241978|m.34819.mrna1 Terpenoid UGT medium pass UGT__00047__sp_K7NBW3_74AC1_SIRGR
5A_I16_VO_L_3074_T_89/89|m.49426.mrna2 Terpenoid UGT medium pass UGT__00075__sp_Q7Y232_U73B4_ARATH
5A_I16_VO_L_4_T_65838/214906|m.48071.mrna1 Terpenoid UGT medium pass UGT__00038__sp_K4CWS6_U75C1_SOLLC
6A_I23_NT_comp44453_c0_seq2|m.58668.mrna1 Terpenoid UGT medium pass UGT__00075__sp_Q7Y232_U73B4_ARATH
PITA_000000003-RA Terpenoid UGT medium pass UGT__00114__sp_U3THC0_FG2KI_SOYBN
PITA_000000004-RA Terpenoid UGT medium pass UGT__00035__sp_I1KEV6_FG3H_SOYBN
PITA_000000186-RA Terpenoid UGT low borderline UGT__00057__sp_O81498_U72E3_ARATH
PITA_000000276-RA Terpenoid UGT medium pass UGT__00103__sp_Q9M156_U72B1_ARATH
PITA_000000385-RA Terpenoid UGT medium pass UGT__00032__sp_F8WKW1_UGT2_GARJA
PITA_000000672-RA Terpenoid UGT medium pass UGT__00070__sp_Q5XF20_U84A1_ARATH
PITA_000000673-RA Terpenoid UGT medium pass UGT__00038__sp_K4CWS6_U75C1_SOLLC
PITA_000000694-RA Terpenoid UGT medium pass UGT__00038__sp_K4CWS6_U75C1_SOLLC
PITA_000000941-RA Terpenoid UGT low borderline UGT__00105__sp_Q9SK82_U85A1_ARATH
PITA_000001275-RA Terpenoid UGT low borderline UGT__00105__sp_Q9SK82_U85A1_ARATH
PITA_000001285-RA Terpenoid UGT medium pass UGT__00106__sp_Q9SKC5_U74D1_ARATH
PITA_000001286-RA Terpenoid UGT medium pass UGT__00108__sp_Q9SYK9_U74E2_ARATH