PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

6129
Candidate Protein Records
5262
Pathway-Level Records
12692
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Protein/Isoform Record Pathway Family Confidence Status Best Target
PITA_000007028-RA Phenylpropanoid POD medium pass POD__00001__sp_A5H452_PER70_MAIZE
PITA_000007029-RA Phenylpropanoid POD medium pass POD__00001__sp_A5H452_PER70_MAIZE
PITA_000007030-RA Phenylpropanoid POD medium pass POD__00001__sp_A5H452_PER70_MAIZE
PITA_000007061-RA Phenylpropanoid POD medium pass POD__00019__sp_Q949Y3_PPA26_ARATH
PITA_000007252-RA Phenylpropanoid POD medium pass POD__00010__sp_P84516_PER1_SORBI
PITA_000007375-RA Phenylpropanoid POD medium pass POD__00006__sp_O22850_GPX3_ARATH
PITA_000007376-RA Phenylpropanoid POD medium pass POD__00006__sp_O22850_GPX3_ARATH
PITA_000007550-RA Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
PITA_000007786-RA Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
PITA_000007862-RA Phenylpropanoid POD medium pass POD__00027__sp_Q9XIV8_PERN1_TOBAC
PITA_000007864-RA Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
PITA_000008331-RA Phenylpropanoid POD medium pass POD__00019__sp_Q949Y3_PPA26_ARATH
PITA_000008713-RA Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
PITA_000008714-RA Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
PITA_000008719-RA Phenylpropanoid POD low borderline POD__00021__sp_Q9LEH3_PER15_IPOBA
PITA_000009670-RA Phenylpropanoid POD medium pass POD__00006__sp_O22850_GPX3_ARATH
PITA_000009671-RA Phenylpropanoid POD medium pass POD__00006__sp_O22850_GPX3_ARATH
PITA_000009673-RA Phenylpropanoid POD medium pass POD__00006__sp_O22850_GPX3_ARATH
PITA_000009675-RA Phenylpropanoid POD medium pass POD__00006__sp_O22850_GPX3_ARATH
PITA_000009981-RA Phenylpropanoid POD low borderline POD__00001__sp_A5H452_PER70_MAIZE
PITA_000010387-RA Phenylpropanoid POD medium pass POD__00001__sp_A5H452_PER70_MAIZE
PITA_000011032-RA Phenylpropanoid POD medium pass POD__00010__sp_P84516_PER1_SORBI
PITA_000011624-RA Phenylpropanoid POD medium pass POD__00002__sp_A5H8G4_PER1_MAIZE
PITA_000011652-RA Phenylpropanoid POD medium pass POD__00001__sp_A5H452_PER70_MAIZE
PITA_000011656-RA Phenylpropanoid POD medium pass POD__00001__sp_A5H452_PER70_MAIZE
PITA_000011657-RA Phenylpropanoid POD medium pass POD__00001__sp_A5H452_PER70_MAIZE
PITA_000011738-RA Phenylpropanoid POD medium pass POD__00027__sp_Q9XIV8_PERN1_TOBAC
PITA_000011834-RA Phenylpropanoid POD low borderline POD__00006__sp_O22850_GPX3_ARATH
PITA_000011969-RA Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
PITA_000011971-RA Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
PITA_000012416-RA Phenylpropanoid POD medium pass POD__00001__sp_A5H452_PER70_MAIZE
PITA_000012532-RA Phenylpropanoid POD medium pass POD__00019__sp_Q949Y3_PPA26_ARATH
PITA_000012682-RA Phenylpropanoid POD medium pass POD__00027__sp_Q9XIV8_PERN1_TOBAC
PITA_000013129-RA Phenylpropanoid POD low borderline POD__00001__sp_A5H452_PER70_MAIZE
PITA_000013130-RA Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
PITA_000013161-RA Phenylpropanoid POD medium pass POD__00020__sp_Q9FE01_APX2_ORYSJ
PITA_000013248-RA Phenylpropanoid POD medium pass POD__00001__sp_A5H452_PER70_MAIZE
PITA_000013424-RA Phenylpropanoid POD medium pass POD__00019__sp_Q949Y3_PPA26_ARATH
PITA_000013745-RA Phenylpropanoid POD low borderline POD__00026__sp_Q9XEX2_PRX2B_ARATH
PITA_000013956-RA Phenylpropanoid POD medium pass POD__00010__sp_P84516_PER1_SORBI
PITA_000013959-RA Phenylpropanoid POD medium pass POD__00010__sp_P84516_PER1_SORBI
PITA_000014107-RA Phenylpropanoid POD medium pass POD__00027__sp_Q9XIV8_PERN1_TOBAC
PITA_000014187-RA Phenylpropanoid POD medium pass POD__00024__sp_Q9SCX8_PPA17_ARATH
PITA_000014188-RA Phenylpropanoid POD medium pass POD__00024__sp_Q9SCX8_PPA17_ARATH
PITA_000014189-RA Phenylpropanoid POD low borderline POD__00024__sp_Q9SCX8_PPA17_ARATH
PITA_000014190-RA Phenylpropanoid POD medium pass POD__00024__sp_Q9SCX8_PPA17_ARATH
PITA_000014391-RA Phenylpropanoid POD medium pass POD__00001__sp_A5H452_PER70_MAIZE
PITA_000014488-RA Phenylpropanoid POD medium pass POD__00010__sp_P84516_PER1_SORBI
PITA_000014847-RA Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
PITA_000015123-RA Phenylpropanoid POD medium pass POD__00019__sp_Q949Y3_PPA26_ARATH