PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

6129
Candidate Protein Records
5262
Pathway-Level Records
12692
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
PITA_000046766-RA Flavonoid UFGT medium pass
PITA_000047044-RA Flavonoid UFGT medium pass
PITA_000047045-RA Flavonoid UFGT medium pass
PITA_000047582-RA Flavonoid UFGT high pass
PITA_000047646-RA Flavonoid UFGT low borderline
PITA_000047788-RA Flavonoid UFGT medium pass
PITA_000048176-RA Flavonoid UFGT high pass
PITA_000048706-RA Flavonoid UFGT low borderline
PITA_000048810-RA Flavonoid UFGT low borderline
PITA_000049147-RA Flavonoid UFGT medium pass
PITA_000049390-RA Flavonoid UFGT medium pass
PITA_000049394-RA Flavonoid UFGT high pass
PITA_000049780-RA Flavonoid UFGT low borderline
PITA_000050251-RA Flavonoid UFGT high pass
PITA_000050381-RA Flavonoid UFGT low borderline
PITA_000050777-RA Flavonoid UFGT medium pass
PITA_000050819-RA Flavonoid UFGT medium pass
PITA_000050841-RA Flavonoid UFGT medium pass
PITA_000050842-RA Flavonoid UFGT low borderline
PITA_000051383-RA Flavonoid UFGT medium pass
PITA_000051674-RA Flavonoid UFGT high pass
PITA_000051707-RA Flavonoid UFGT medium pass
PITA_000051936-RA Flavonoid UFGT medium pass
PITA_000052139-RA Flavonoid UFGT medium pass
PITA_000052357-RA Flavonoid UFGT high pass
PITA_000052622-RA Flavonoid UFGT low borderline
PITA_000052999-RA Flavonoid UFGT low borderline
PITA_000053117-RA Flavonoid UFGT low borderline
PITA_000053205-RA Flavonoid UFGT high pass
PITA_000053324-RA Flavonoid UFGT high pass
PITA_000053325-RA Flavonoid UFGT high pass
PITA_000053326-RA Flavonoid UFGT high pass
PITA_000053388-RA Flavonoid UFGT medium pass
PITA_000053735-RA Flavonoid UFGT medium pass
PITA_000054073-RA Flavonoid UFGT high pass
PITA_000054193-RA Flavonoid UFGT medium pass
PITA_000054420-RA Flavonoid UFGT high pass
PITA_000055105-RA Flavonoid UFGT medium pass
PITA_000055201-RA Flavonoid UFGT medium pass
PITA_000055321-RA Flavonoid UFGT high pass
PITA_000055617-RA Flavonoid UFGT low borderline
PITA_000055675-RA Flavonoid UFGT low borderline
PITA_000055676-RA Flavonoid UFGT medium pass
PITA_000055775-RA Flavonoid UFGT high pass
PITA_000055978-RA Flavonoid UFGT high pass
PITA_000056910-RA Flavonoid UFGT high pass
PITA_000057220-RA Flavonoid UFGT medium pass
PITA_000057489-RA Flavonoid UFGT medium pass
PITA_000057878-RA Flavonoid UFGT medium pass
PITA_000058443-RA Flavonoid UFGT high pass