PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

6129
Candidate Protein Records
5262
Pathway-Level Records
12692
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Protein/Isoform Record Pathway Family Confidence Status
PITA_000091810-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000091837-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000091853-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000091868-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000092170-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000092575-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000092686-RA Steroid BR6OX2/CYP85A2 medium borderline
PITA_000093134-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000093243-RA Steroid BR6OX2/CYP85A2 medium borderline
PITA_000093733-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000094335-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000095564-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000095598-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000095847-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000095848-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000096156-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000096241-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000096595-RA Steroid BR6OX2/CYP85A2 low borderline
PITAhm_000043-RA Steroid BR6OX2/CYP85A2 low borderline
PITAhm_000052-RA Steroid BR6OX2/CYP85A2 medium borderline
PITAhm_001091-RA Steroid BR6OX2/CYP85A2 low borderline
PITAhm_001182-RA Steroid BR6OX2/CYP85A2 low borderline
PITAhm_001669-RA Steroid BR6OX2/CYP85A2 low borderline
PITAhm_002965-RA Steroid BR6OX2/CYP85A2 low borderline
PITAhm_003161-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000000373-RA Steroid CAS low borderline
PITA_000000411-RA Steroid CAS low borderline
PITA_000000412-RA Steroid CAS medium pass
PITA_000000413-RA Steroid CAS low borderline
PITA_000000444-RA Steroid CAS medium pass
PITA_000000451-RA Steroid CAS medium pass
PITA_000000471-RA Steroid CAS medium pass
PITA_000000642-RA Steroid CAS medium pass
PITA_000000848-RA Steroid CAS low borderline
PITA_000001400-RA Steroid CAS low borderline
PITA_000001401-RA Steroid CAS low borderline
PITA_000001529-RA Steroid CAS medium pass
PITA_000002172-RA Steroid CAS medium pass
PITA_000002173-RA Steroid CAS medium pass
PITA_000002174-RA Steroid CAS low borderline
PITA_000002810-RA Steroid CAS medium pass
PITA_000003415-RA Steroid CAS medium pass
PITA_000004052-RA Steroid CAS medium pass
PITA_000004054-RA Steroid CAS medium pass
PITA_000004147-RA Steroid CAS medium pass
PITA_000004762-RA Steroid CAS low borderline
PITA_000005554-RA Steroid CAS medium pass
PITA_000006367-RA Steroid CAS medium pass
PITA_000006880-RA Steroid CAS medium pass
PITA_000009655-RA Steroid CAS medium pass