PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

6129
Candidate Protein Records
5262
Pathway-Level Records
12692
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
PITA_000029032-RA Alkaloid T3O low borderline
PITA_000029594-RA Alkaloid T3O low borderline
PITA_000029785-RA Alkaloid T3O medium borderline
PITA_000029957-RA Alkaloid T3O low borderline
PITA_000030103-RA Alkaloid T3O medium pass
PITA_000030532-RA Alkaloid T3O low borderline
PITA_000032119-RA Alkaloid T3O medium borderline
PITA_000032619-RA Alkaloid T3O medium borderline
PITA_000032770-RA Alkaloid T3O low borderline
PITA_000032930-RA Alkaloid T3O low borderline
PITA_000034704-RA Alkaloid T3O low borderline
PITA_000035404-RA Alkaloid T3O low borderline
PITA_000036291-RA Alkaloid T3O medium borderline
PITA_000036465-RA Alkaloid T3O low borderline
PITA_000036656-RA Alkaloid T3O low borderline
PITA_000038956-RA Alkaloid T3O low borderline
PITA_000039601-RA Alkaloid T3O medium pass
PITA_000040347-RA Alkaloid T3O medium pass
PITA_000040630-RA Alkaloid T3O low borderline
PITA_000041890-RA Alkaloid T3O medium borderline
PITA_000043158-RA Alkaloid T3O low borderline
PITA_000043510-RA Alkaloid T3O low borderline
PITA_000043621-RA Alkaloid T3O low borderline
PITA_000044466-RA Alkaloid T3O low borderline
PITA_000045592-RA Alkaloid T3O low borderline
PITA_000046806-RA Alkaloid T3O medium pass
PITA_000047521-RA Alkaloid T3O medium borderline
PITA_000047526-RA Alkaloid T3O low borderline
PITA_000048237-RA Alkaloid T3O low borderline
PITA_000048238-RA Alkaloid T3O low borderline
PITA_000048290-RA Alkaloid T3O low borderline
PITA_000048445-RA Alkaloid T3O low borderline
PITA_000048497-RA Alkaloid T3O low borderline
PITA_000048971-RA Alkaloid T3O low borderline
PITA_000050286-RA Alkaloid T3O medium borderline
PITA_000050489-RA Alkaloid T3O low borderline
PITA_000050806-RA Alkaloid T3O low borderline
PITA_000051367-RA Alkaloid T3O low borderline
PITA_000051443-RA Alkaloid T3O low borderline
PITA_000052506-RA Alkaloid T3O low borderline
PITA_000052592-RA Alkaloid T3O medium pass
PITA_000052867-RA Alkaloid T3O low borderline
PITA_000053114-RA Alkaloid T3O medium borderline
PITA_000053270-RA Alkaloid T3O medium borderline
PITA_000053544-RA Alkaloid T3O medium borderline
PITA_000053894-RA Alkaloid T3O low borderline
PITA_000053952-RA Alkaloid T3O medium borderline
PITA_000054344-RA Alkaloid T3O low borderline
PITA_000054771-RA Alkaloid T3O low borderline
PITA_000054791-RA Alkaloid T3O low borderline