PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

6129
Candidate Protein Records
5262
Pathway-Level Records
12692
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
PITA_000026839-RA Alkaloid XMT_MXMT_DXMT medium borderline
PITA_000033566-RA Alkaloid XMT_MXMT_DXMT medium borderline
PITA_000040903-RA Alkaloid XMT_MXMT_DXMT low borderline
PITA_000043010-RA Alkaloid XMT_MXMT_DXMT medium borderline
PITA_000052028-RA Alkaloid XMT_MXMT_DXMT medium borderline
PITA_000053367-RA Alkaloid XMT_MXMT_DXMT medium borderline
PITA_000053753-RA Alkaloid XMT_MXMT_DXMT low borderline
PITA_000054323-RA Alkaloid XMT_MXMT_DXMT low borderline
PITA_000059474-RA Alkaloid XMT_MXMT_DXMT low borderline
PITA_000060757-RA Alkaloid XMT_MXMT_DXMT low borderline
PITA_000061012-RA Alkaloid XMT_MXMT_DXMT medium borderline
PITA_000061101-RA Alkaloid XMT_MXMT_DXMT medium borderline
PITA_000061388-RA Alkaloid XMT_MXMT_DXMT low borderline
PITA_000066044-RA Alkaloid XMT_MXMT_DXMT low borderline
PITA_000077336-RA Alkaloid XMT_MXMT_DXMT medium borderline
PITA_000080047-RA Alkaloid XMT_MXMT_DXMT medium borderline
PITA_000081122-RA Alkaloid XMT_MXMT_DXMT medium borderline
PITA_000081927-RA Alkaloid XMT_MXMT_DXMT medium borderline
PITA_000083126-RA Alkaloid XMT_MXMT_DXMT medium borderline
PITA_000088265-RA Alkaloid XMT_MXMT_DXMT medium borderline
PITA_000090788-RA Alkaloid XMT_MXMT_DXMT low borderline
PITA_000090804-RA Alkaloid XMT_MXMT_DXMT low borderline
PITA_000092357-RA Alkaloid XMT_MXMT_DXMT low borderline
PITAhm_001711-RA Alkaloid XMT_MXMT_DXMT low borderline
1A_I3_VO_L_10088_T_4/4|m.8296.mrna1 Flavonoid 4CL low borderline
1A_all_VO_L_10279_T_6/7|m.2355.mrna1 Flavonoid 4CL medium pass
PITA_000000627-RA Flavonoid 4CL medium pass
PITA_000000628-RA Flavonoid 4CL medium pass
PITA_000000651-RA Flavonoid 4CL medium pass
PITA_000000653-RA Flavonoid 4CL medium pass
PITA_000001065-RA Flavonoid 4CL medium pass
PITA_000002470-RA Flavonoid 4CL medium pass
PITA_000002644-RA Flavonoid 4CL medium pass
PITA_000003730-RA Flavonoid 4CL medium pass
PITA_000003990-RA Flavonoid 4CL medium pass
PITA_000004884-RA Flavonoid 4CL medium pass
PITA_000004992-RA Flavonoid 4CL medium pass
PITA_000005558-RA Flavonoid 4CL medium pass
PITA_000006961-RA Flavonoid 4CL medium pass
PITA_000007264-RA Flavonoid 4CL medium pass
PITA_000007266-RA Flavonoid 4CL low borderline
PITA_000007267-RA Flavonoid 4CL medium pass
PITA_000007379-RA Flavonoid 4CL medium pass
PITA_000008745-RA Flavonoid 4CL medium pass
PITA_000009307-RA Flavonoid 4CL medium pass
PITA_000009376-RA Flavonoid 4CL medium pass
PITA_000009377-RA Flavonoid 4CL medium pass
PITA_000010722-RA Flavonoid 4CL medium pass
PITA_000012257-RA Flavonoid 4CL low borderline
PITA_000014427-RA Flavonoid 4CL medium pass