PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

6129
Candidate Protein Records
5262
Pathway-Level Records
12692
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Protein/Isoform Record Pathway Family Confidence Status Best Target
PITA_000037544-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000037892-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000038511-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000040152-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000040153-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000041743-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000042894-RA Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
PITA_000043583-RA Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
PITA_000044974-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000045097-RA Steroid CAS low borderline CAS__00007__sp_Q43153_CYSC_SPIOL
PITA_000045132-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000045133-RA Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000045134-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000045205-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000045618-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000045870-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000045871-RA Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000046233-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000046285-RA Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000046556-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000046557-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000046831-RA Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000047230-RA Steroid CAS medium pass CAS__00009__sp_Q6Z2X6_CAS_ORYSJ
PITA_000048243-RA Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
PITA_000048496-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000048776-RA Steroid CAS low borderline CAS__00007__sp_Q43153_CYSC_SPIOL
PITA_000049622-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000049912-RA Steroid CAS low borderline CAS__00007__sp_Q43153_CYSC_SPIOL
PITA_000050310-RA Steroid CAS medium pass CAS__00014__sp_Q9SXV6_CAS1_GLYGL
PITA_000050354-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000051547-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000051560-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000051609-RA Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000052332-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000052334-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000052495-RA Steroid CAS low borderline CAS__00007__sp_Q43153_CYSC_SPIOL
PITA_000053187-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000053256-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000053280-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000053802-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000053861-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000054679-RA Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
PITA_000054680-RA Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
PITA_000054694-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000054962-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000054963-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000055269-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000057755-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000057896-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000059237-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA