PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

6129
Candidate Protein Records
5262
Pathway-Level Records
12692
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
PITA_000085476-RA Alkaloid 7DLGT low borderline
PITA_000085533-RA Alkaloid 7DLGT medium pass
PITA_000085680-RA Alkaloid 7DLGT low borderline
PITA_000086310-RA Alkaloid 7DLGT medium pass
PITA_000086322-RA Alkaloid 7DLGT low borderline
PITA_000086531-RA Alkaloid 7DLGT low borderline
PITA_000086713-RA Alkaloid 7DLGT medium pass
PITA_000086859-RA Alkaloid 7DLGT low borderline
PITA_000086860-RA Alkaloid 7DLGT low borderline
PITA_000087532-RA Alkaloid 7DLGT low borderline
PITA_000087533-RA Alkaloid 7DLGT low borderline
PITA_000087876-RA Alkaloid 7DLGT medium pass
PITA_000088047-RA Alkaloid 7DLGT low borderline
PITA_000088101-RA Alkaloid 7DLGT medium pass
PITA_000088123-RA Alkaloid 7DLGT low borderline
PITA_000088179-RA Alkaloid 7DLGT medium pass
PITA_000088235-RA Alkaloid 7DLGT low borderline
PITA_000088263-RA Alkaloid 7DLGT medium pass
PITA_000088393-RA Alkaloid 7DLGT low borderline
PITA_000088518-RA Alkaloid 7DLGT low borderline
PITA_000088786-RA Alkaloid 7DLGT low borderline
PITA_000088829-RA Alkaloid 7DLGT medium pass
PITA_000088933-RA Alkaloid 7DLGT low borderline
PITA_000088955-RA Alkaloid 7DLGT low borderline
PITA_000089013-RA Alkaloid 7DLGT medium pass
PITA_000089056-RA Alkaloid 7DLGT low borderline
PITA_000089164-RA Alkaloid 7DLGT low borderline
PITA_000089197-RA Alkaloid 7DLGT low borderline
PITA_000089217-RA Alkaloid 7DLGT medium pass
PITA_000089266-RA Alkaloid 7DLGT medium pass
PITA_000089291-RA Alkaloid 7DLGT low borderline
PITA_000089469-RA Alkaloid 7DLGT medium pass
PITA_000089638-RA Alkaloid 7DLGT low borderline
PITA_000089796-RA Alkaloid 7DLGT high pass
PITA_000089904-RA Alkaloid 7DLGT low borderline
PITA_000090099-RA Alkaloid 7DLGT low borderline
PITA_000090240-RA Alkaloid 7DLGT medium pass
PITA_000090267-RA Alkaloid 7DLGT medium pass
PITA_000090381-RA Alkaloid 7DLGT medium pass
PITA_000090403-RA Alkaloid 7DLGT low borderline
PITA_000090515-RA Alkaloid 7DLGT low borderline
PITA_000090551-RA Alkaloid 7DLGT low borderline
PITA_000090766-RA Alkaloid 7DLGT medium pass
PITA_000090811-RA Alkaloid 7DLGT high pass
PITA_000091027-RA Alkaloid 7DLGT medium pass
PITA_000091126-RA Alkaloid 7DLGT medium pass
PITA_000091190-RA Alkaloid 7DLGT low borderline
PITA_000091259-RA Alkaloid 7DLGT medium pass
PITA_000091405-RA Alkaloid 7DLGT low borderline
PITA_000091480-RA Alkaloid 7DLGT low borderline