PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

6129
Candidate Protein Records
5262
Pathway-Level Records
12692
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
Reset
Protein/Isoform Record Pathway Family Confidence Status
PITA_000091494-RA Alkaloid 7DLGT low borderline
PITA_000091673-RA Alkaloid 7DLGT medium pass
PITA_000091872-RA Alkaloid 7DLGT medium pass
PITA_000091966-RA Alkaloid 7DLGT low borderline
PITA_000092089-RA Alkaloid 7DLGT medium pass
PITA_000092322-RA Alkaloid 7DLGT high pass
PITA_000092424-RA Alkaloid 7DLGT low borderline
PITA_000092472-RA Alkaloid 7DLGT low borderline
PITA_000092619-RA Alkaloid 7DLGT low borderline
PITA_000092681-RA Alkaloid 7DLGT low borderline
PITA_000092920-RA Alkaloid 7DLGT medium pass
PITA_000092924-RA Alkaloid 7DLGT medium pass
PITA_000093019-RA Alkaloid 7DLGT medium pass
PITA_000093140-RA Alkaloid 7DLGT low borderline
PITA_000093362-RA Alkaloid 7DLGT medium pass
PITA_000093681-RA Alkaloid 7DLGT medium pass
PITA_000093797-RA Alkaloid 7DLGT low borderline
PITA_000094107-RA Alkaloid 7DLGT low borderline
PITA_000094431-RA Alkaloid 7DLGT low borderline
PITA_000094434-RA Alkaloid 7DLGT medium pass
PITA_000094494-RA Alkaloid 7DLGT low borderline
PITA_000094533-RA Alkaloid 7DLGT low borderline
PITA_000095230-RA Alkaloid 7DLGT low borderline
PITA_000095265-RA Alkaloid 7DLGT low borderline
PITA_000095279-RA Alkaloid 7DLGT medium pass
PITA_000095287-RA Alkaloid 7DLGT medium pass
PITA_000095898-RA Alkaloid 7DLGT high pass
PITA_000096183-RA Alkaloid 7DLGT medium pass
PITA_000096345-RA Alkaloid 7DLGT medium pass
PITA_000096425-RA Alkaloid 7DLGT medium pass
PITAhm_000395-RA Alkaloid 7DLGT low borderline
PITAhm_000823-RA Alkaloid 7DLGT high pass
PITAhm_000824-RA Alkaloid 7DLGT medium pass
PITAhm_000863-RA Alkaloid 7DLGT medium pass
PITAhm_001130-RA Alkaloid 7DLGT medium pass
PITAhm_002617-RA Alkaloid 7DLGT medium pass
PITAhm_002661-RA Alkaloid 7DLGT medium pass
PITA_000001150-RA Alkaloid 7DLH low borderline
PITA_000005076-RA Alkaloid 7DLH medium borderline
PITA_000006812-RA Alkaloid 7DLH low borderline
PITA_000007754-RA Alkaloid 7DLH medium borderline
PITA_000007873-RA Alkaloid 7DLH low borderline
PITA_000012074-RA Alkaloid 7DLH low borderline
PITA_000019034-RA Alkaloid 7DLH medium borderline
PITA_000020567-RA Alkaloid 7DLH low borderline
PITA_000020637-RA Alkaloid 7DLH medium borderline
PITA_000021538-RA Alkaloid 7DLH medium borderline
PITA_000022145-RA Alkaloid 7DLH medium borderline
PITA_000022477-RA Alkaloid 7DLH low borderline
PITA_000025223-RA Alkaloid 7DLH medium borderline