PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

6129
Candidate Protein Records
5262
Pathway-Level Records
12692
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
PITA_000074853-RA Rosmarinic Acid PAL high pass
PITA_000074958-RA Rosmarinic Acid PAL medium pass
PITA_000075110-RA Rosmarinic Acid PAL high pass
PITA_000077002-RA Rosmarinic Acid PAL high pass
PITA_000078355-RA Rosmarinic Acid PAL high pass
PITA_000079302-RA Rosmarinic Acid PAL medium pass
PITA_000079303-RA Rosmarinic Acid PAL low borderline
PITA_000079629-RA Rosmarinic Acid PAL high pass
PITA_000080150-RA Rosmarinic Acid PAL medium pass
PITA_000080473-RA Rosmarinic Acid PAL high pass
PITA_000082179-RA Rosmarinic Acid PAL high pass
PITA_000086462-RA Rosmarinic Acid PAL high pass
PITA_000093606-RA Rosmarinic Acid PAL high pass
PITA_000094991-RA Rosmarinic Acid PAL medium pass
PITA_000094992-RA Rosmarinic Acid PAL high pass
PITA_000095146-RA Rosmarinic Acid PAL medium pass
PITA_000095762-RA Rosmarinic Acid PAL medium pass
PITA_000096539-RA Rosmarinic Acid PAL medium pass
PITA_000096540-RA Rosmarinic Acid PAL high pass
PITA_000096541-RA Rosmarinic Acid PAL medium pass
2A_all_NT_comp86965_c0_seq1|m.13007.mrna1 Rosmarinic Acid RAS medium pass
3A_I18_VO_L_2_T_128098/136250|m.33128.mrna1 Rosmarinic Acid RAS medium pass
PITA_000000833-RA Rosmarinic Acid RAS medium pass
PITA_000000950-RA Rosmarinic Acid RAS medium pass
PITA_000001636-RA Rosmarinic Acid RAS low borderline
PITA_000002175-RA Rosmarinic Acid RAS medium pass
PITA_000002181-RA Rosmarinic Acid RAS low borderline
PITA_000009151-RA Rosmarinic Acid RAS medium pass
PITA_000009533-RA Rosmarinic Acid RAS medium pass
PITA_000011445-RA Rosmarinic Acid RAS medium pass
PITA_000014608-RA Rosmarinic Acid RAS low borderline
PITA_000014609-RA Rosmarinic Acid RAS low borderline
PITA_000021157-RA Rosmarinic Acid RAS medium pass
PITA_000022739-RA Rosmarinic Acid RAS low borderline
PITA_000023110-RA Rosmarinic Acid RAS low borderline
PITA_000023153-RA Rosmarinic Acid RAS medium pass
PITA_000025302-RA Rosmarinic Acid RAS medium pass
PITA_000025947-RA Rosmarinic Acid RAS medium pass
PITA_000025948-RA Rosmarinic Acid RAS medium pass
PITA_000026379-RA Rosmarinic Acid RAS medium pass
PITA_000026467-RA Rosmarinic Acid RAS medium pass
PITA_000028396-RA Rosmarinic Acid RAS low borderline
PITA_000028397-RA Rosmarinic Acid RAS low borderline
PITA_000028422-RA Rosmarinic Acid RAS low borderline
PITA_000029371-RA Rosmarinic Acid RAS medium pass
PITA_000030323-RA Rosmarinic Acid RAS low borderline
PITA_000030936-RA Rosmarinic Acid RAS medium pass
PITA_000031066-RA Rosmarinic Acid RAS medium pass
PITA_000031611-RA Rosmarinic Acid RAS medium pass
PITA_000032042-RA Rosmarinic Acid RAS medium pass