PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

6129
Candidate Protein Records
5262
Pathway-Level Records
12692
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
PITA_000071802-RA Phenylpropanoid CAD medium pass
PITA_000072088-RA Phenylpropanoid CAD medium pass
PITA_000072099-RA Phenylpropanoid CAD medium pass
PITA_000072122-RA Phenylpropanoid CAD medium pass
PITA_000072203-RA Phenylpropanoid CAD medium borderline
PITA_000072406-RA Phenylpropanoid CAD medium borderline
PITA_000073505-RA Phenylpropanoid CAD medium pass
PITA_000073888-RA Phenylpropanoid CAD medium pass
PITA_000073941-RA Phenylpropanoid CAD medium pass
PITA_000074056-RA Phenylpropanoid CAD low borderline
PITA_000074244-RA Phenylpropanoid CAD medium pass
PITA_000075051-RA Phenylpropanoid CAD medium pass
PITA_000075203-RA Phenylpropanoid CAD medium pass
PITA_000075777-RA Phenylpropanoid CAD low borderline
PITA_000075875-RA Phenylpropanoid CAD low borderline
PITA_000075921-RA Phenylpropanoid CAD medium pass
PITA_000075965-RA Phenylpropanoid CAD medium pass
PITA_000076214-RA Phenylpropanoid CAD medium pass
PITA_000076698-RA Phenylpropanoid CAD medium borderline
PITA_000076974-RA Phenylpropanoid CAD medium pass
PITA_000077719-RA Phenylpropanoid CAD medium pass
PITA_000078788-RA Phenylpropanoid CAD low borderline
PITA_000078947-RA Phenylpropanoid CAD low borderline
PITA_000079152-RA Phenylpropanoid CAD medium pass
PITA_000079854-RA Phenylpropanoid CAD medium pass
PITA_000080108-RA Phenylpropanoid CAD low borderline
PITA_000080199-RA Phenylpropanoid CAD medium pass
PITA_000080200-RA Phenylpropanoid CAD medium pass
PITA_000080358-RA Phenylpropanoid CAD low borderline
PITA_000080390-RA Phenylpropanoid CAD low borderline
PITA_000080393-RA Phenylpropanoid CAD low borderline
PITA_000080607-RA Phenylpropanoid CAD medium pass
PITA_000080668-RA Phenylpropanoid CAD medium pass
PITA_000080767-RA Phenylpropanoid CAD medium pass
PITA_000081016-RA Phenylpropanoid CAD medium pass
PITA_000081120-RA Phenylpropanoid CAD medium pass
PITA_000081232-RA Phenylpropanoid CAD medium pass
PITA_000081290-RA Phenylpropanoid CAD low borderline
PITA_000082681-RA Phenylpropanoid CAD low borderline
PITA_000082835-RA Phenylpropanoid CAD medium pass
PITA_000083259-RA Phenylpropanoid CAD medium pass
PITA_000083432-RA Phenylpropanoid CAD low borderline
PITA_000083789-RA Phenylpropanoid CAD medium pass
PITA_000084016-RA Phenylpropanoid CAD low borderline
PITA_000084227-RA Phenylpropanoid CAD low borderline
PITA_000084285-RA Phenylpropanoid CAD medium pass
PITA_000084532-RA Phenylpropanoid CAD medium pass
PITA_000085757-RA Phenylpropanoid CAD medium pass
PITA_000085967-RA Phenylpropanoid CAD low borderline
PITA_000086597-RA Phenylpropanoid CAD medium pass