PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

6129
Candidate Protein Records
5262
Pathway-Level Records
12692
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
Reset
Protein/Isoform Record Pathway Family Confidence Status
PITA_000095920-RA Terpenoid CYP76 medium pass
PITA_000096080-RA Terpenoid CYP76 medium pass
PITA_000096105-RA Terpenoid CYP76 low borderline
PITA_000096128-RA Terpenoid CYP76 medium pass
PITA_000096156-RA Terpenoid CYP76 medium pass
PITA_000096549-RA Terpenoid CYP76 medium borderline
PITA_000096595-RA Terpenoid CYP76 medium pass
PITAhm_000043-RA Terpenoid CYP76 medium borderline
PITAhm_000305-RA Terpenoid CYP76 medium borderline
PITAhm_000366-RA Terpenoid CYP76 low borderline
PITAhm_000494-RA Terpenoid CYP76 medium borderline
PITAhm_000578-RA Terpenoid CYP76 medium borderline
PITAhm_001091-RA Terpenoid CYP76 medium pass
PITAhm_001182-RA Terpenoid CYP76 medium borderline
PITAhm_002308-RA Terpenoid CYP76 medium borderline
PITAhm_002517-RA Terpenoid CYP76 low borderline
PITAhm_002965-RA Terpenoid CYP76 medium borderline
PITAhm_003161-RA Terpenoid CYP76 medium borderline
PITAhm_003318-RA Terpenoid CYP76 medium borderline
PITA_000009808-RA Terpenoid DXR high pass
PITA_000045405-RA Terpenoid DXR low borderline
PITA_000003442-RA Terpenoid DXS low borderline
PITA_000041050-RA Terpenoid DXS medium pass
PITA_000063567-RA Terpenoid DXS low borderline
PITA_000069658-RA Terpenoid DXS low borderline
PITA_000071321-RA Terpenoid DXS medium pass
PITA_000084918-RA Terpenoid DXS low borderline
PITA_000000834-RA Terpenoid FPPS medium pass
PITA_000001946-RA Terpenoid FPPS medium pass
PITA_000002089-RA Terpenoid FPPS medium borderline
PITA_000003113-RA Terpenoid FPPS low borderline
PITA_000011837-RA Terpenoid FPPS medium borderline
PITA_000021541-RA Terpenoid FPPS medium borderline
PITA_000024654-RA Terpenoid FPPS medium borderline
PITA_000036593-RA Terpenoid FPPS medium borderline
PITA_000038410-RA Terpenoid FPPS medium borderline
PITA_000042940-RA Terpenoid FPPS medium pass
PITA_000043577-RA Terpenoid FPPS medium borderline
PITA_000050436-RA Terpenoid FPPS medium borderline
PITA_000055290-RA Terpenoid FPPS low borderline
PITA_000055550-RA Terpenoid FPPS low borderline
PITA_000055707-RA Terpenoid FPPS medium borderline
PITA_000060690-RA Terpenoid FPPS medium borderline
PITA_000065844-RA Terpenoid FPPS medium pass
PITA_000068690-RA Terpenoid FPPS medium pass
PITA_000073142-RA Terpenoid FPPS low borderline
PITA_000073806-RA Terpenoid FPPS low borderline
PITA_000082471-RA Terpenoid FPPS medium borderline
PITA_000088212-RA Terpenoid FPPS medium pass
PITA_000089578-RA Terpenoid FPPS medium borderline