PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

6129
Candidate Protein Records
5262
Pathway-Level Records
12692
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
PITA_000021232-RA Flavonoid IFR medium pass
PITA_000021884-RA Flavonoid IFR low borderline
PITA_000022482-RA Flavonoid IFR medium pass
PITA_000023758-RA Flavonoid IFR low borderline
PITA_000024802-RA Flavonoid IFR medium pass
PITA_000024916-RA Flavonoid IFR medium pass
PITA_000026274-RA Flavonoid IFR low borderline
PITA_000027243-RA Flavonoid IFR medium pass
PITA_000027244-RA Flavonoid IFR low borderline
PITA_000029134-RA Flavonoid IFR low borderline
PITA_000030077-RA Flavonoid IFR low borderline
PITA_000030124-RA Flavonoid IFR low borderline
PITA_000030939-RA Flavonoid IFR low borderline
PITA_000031496-RA Flavonoid IFR medium pass
PITA_000032198-RA Flavonoid IFR medium pass
PITA_000032285-RA Flavonoid IFR medium pass
PITA_000032301-RA Flavonoid IFR low borderline
PITA_000032370-RA Flavonoid IFR medium pass
PITA_000032371-RA Flavonoid IFR high pass
PITA_000032372-RA Flavonoid IFR high pass
PITA_000032886-RA Flavonoid IFR low borderline
PITA_000033527-RA Flavonoid IFR low borderline
PITA_000033590-RA Flavonoid IFR low borderline
PITA_000034311-RA Flavonoid IFR low borderline
PITA_000034479-RA Flavonoid IFR low borderline
PITA_000036233-RA Flavonoid IFR low borderline
PITA_000037183-RA Flavonoid IFR medium pass
PITA_000037380-RA Flavonoid IFR high pass
PITA_000039525-RA Flavonoid IFR medium pass
PITA_000040474-RA Flavonoid IFR low borderline
PITA_000040478-RA Flavonoid IFR low borderline
PITA_000040582-RA Flavonoid IFR low borderline
PITA_000040908-RA Flavonoid IFR low borderline
PITA_000041502-RA Flavonoid IFR low borderline
PITA_000043241-RA Flavonoid IFR medium pass
PITA_000043474-RA Flavonoid IFR low borderline
PITA_000043679-RA Flavonoid IFR high pass
PITA_000044480-RA Flavonoid IFR low borderline
PITA_000045885-RA Flavonoid IFR low borderline
PITA_000046731-RA Flavonoid IFR low borderline
PITA_000047724-RA Flavonoid IFR high pass
PITA_000048700-RA Flavonoid IFR high pass
PITA_000048807-RA Flavonoid IFR low borderline
PITA_000050000-RA Flavonoid IFR medium pass
PITA_000050506-RA Flavonoid IFR high pass
PITA_000050669-RA Flavonoid IFR low borderline
PITA_000052350-RA Flavonoid IFR low borderline
PITA_000053115-RA Flavonoid IFR low borderline
PITA_000053551-RA Flavonoid IFR medium pass
PITA_000053681-RA Flavonoid IFR low borderline