PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

6129
Candidate Protein Records
5262
Pathway-Level Records
12692
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
PITA_000053682-RA Flavonoid IFR high pass
PITA_000054071-RA Flavonoid IFR high pass
PITA_000054415-RA Flavonoid IFR medium pass
PITA_000054881-RA Flavonoid IFR low borderline
PITA_000055059-RA Flavonoid IFR high pass
PITA_000055142-RA Flavonoid IFR low borderline
PITA_000055161-RA Flavonoid IFR low borderline
PITA_000055578-RA Flavonoid IFR low borderline
PITA_000056163-RA Flavonoid IFR low borderline
PITA_000057496-RA Flavonoid IFR high pass
PITA_000057529-RA Flavonoid IFR low borderline
PITA_000057836-RA Flavonoid IFR low borderline
PITA_000058607-RA Flavonoid IFR low borderline
PITA_000058980-RA Flavonoid IFR low borderline
PITA_000059305-RA Flavonoid IFR low borderline
PITA_000059796-RA Flavonoid IFR low borderline
PITA_000061041-RA Flavonoid IFR medium pass
PITA_000062026-RA Flavonoid IFR medium pass
PITA_000062171-RA Flavonoid IFR medium pass
PITA_000062333-RA Flavonoid IFR high pass
PITA_000063032-RA Flavonoid IFR high pass
PITA_000064120-RA Flavonoid IFR low borderline
PITA_000064433-RA Flavonoid IFR low borderline
PITA_000064900-RA Flavonoid IFR medium pass
PITA_000065159-RA Flavonoid IFR low borderline
PITA_000065318-RA Flavonoid IFR high pass
PITA_000065547-RA Flavonoid IFR medium pass
PITA_000065548-RA Flavonoid IFR medium pass
PITA_000065822-RA Flavonoid IFR medium pass
PITA_000065890-RA Flavonoid IFR medium pass
PITA_000066057-RA Flavonoid IFR low borderline
PITA_000067252-RA Flavonoid IFR high pass
PITA_000067499-RA Flavonoid IFR medium pass
PITA_000067590-RA Flavonoid IFR high pass
PITA_000068997-RA Flavonoid IFR low borderline
PITA_000069096-RA Flavonoid IFR high pass
PITA_000069108-RA Flavonoid IFR low borderline
PITA_000069112-RA Flavonoid IFR medium pass
PITA_000069838-RA Flavonoid IFR medium pass
PITA_000071530-RA Flavonoid IFR high pass
PITA_000071884-RA Flavonoid IFR low borderline
PITA_000072640-RA Flavonoid IFR medium pass
PITA_000073917-RA Flavonoid IFR low borderline
PITA_000074032-RA Flavonoid IFR low borderline
PITA_000074033-RA Flavonoid IFR low borderline
PITA_000074095-RA Flavonoid IFR high pass
PITA_000074207-RA Flavonoid IFR high pass
PITA_000074380-RA Flavonoid IFR low borderline
PITA_000074767-RA Flavonoid IFR low borderline
PITA_000075008-RA Flavonoid IFR low borderline