PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

5262
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
Reset
Gene Pathway Family Confidence Status Best Target
PITA_000021000-RA Terpenoid BAHD medium pass BAHD__00074__sp_Q9FFQ7_FACT_ARATH
PITA_000021021-RA Terpenoid BAHD low borderline BAHD__00025__sp_O64810_SCP10_ARATH
PITA_000021024-RA Terpenoid BAHD low borderline BAHD__00026__sp_O64811_SCP9_ARATH
PITA_000021027-RA Terpenoid BAHD medium pass BAHD__00025__sp_O64810_SCP10_ARATH
PITA_000021157-RA Terpenoid BAHD medium pass BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
PITA_000021328-RA Terpenoid BAHD medium pass BAHD__00001__sp_A0A068BGA5_AT1_ACTDE
PITA_000021460-RA Terpenoid BAHD medium pass BAHD__00053__sp_Q8GXU8_LPAT1_ARATH
PITA_000021818-RA Terpenoid BAHD low borderline BAHD__00055__sp_Q8H780_SCP13_ARATH
PITA_000022026-RA Terpenoid BAHD low borderline BAHD__00009__sp_A0A4P1QUJ3_TTHAT_LUPAN
PITA_000022156-RA Terpenoid BAHD medium pass BAHD__00068__sp_Q9C533_ZDHC1_ARATH
PITA_000022168-RA Terpenoid BAHD medium pass BAHD__00011__sp_A1A442_DGAT2_RICCO
PITA_000022432-RA Terpenoid BAHD low borderline BAHD__00012__sp_A1XWY7_CFAT_PETHY
PITA_000023153-RA Terpenoid BAHD medium pass BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
PITA_000023154-RA Terpenoid BAHD medium pass BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
PITA_000023346-RA Terpenoid BAHD medium pass BAHD__00047__sp_Q5KS41_WSD11_ARATH
PITA_000023611-RA Terpenoid BAHD medium pass BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
PITA_000023693-RA Terpenoid BAHD medium pass BAHD__00068__sp_Q9C533_ZDHC1_ARATH
PITA_000023819-RA Terpenoid BAHD low borderline BAHD__00089__sp_Q9SB58_ZDH19_ARATH
PITA_000023820-RA Terpenoid BAHD medium pass BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH
PITA_000024038-RA Terpenoid BAHD medium pass BAHD__00055__sp_Q8H780_SCP13_ARATH
PITA_000024081-RA Terpenoid BAHD medium pass BAHD__00011__sp_A1A442_DGAT2_RICCO
PITA_000024254-RA Terpenoid BAHD low borderline BAHD__00087__sp_Q9M3B1_WSD6_ARATH
PITA_000024329-RA Terpenoid BAHD low borderline BAHD__00047__sp_Q5KS41_WSD11_ARATH
PITA_000024442-RA Terpenoid BAHD medium pass BAHD__00025__sp_O64810_SCP10_ARATH
PITA_000024445-RA Terpenoid BAHD medium pass BAHD__00025__sp_O64810_SCP10_ARATH
PITA_000024586-RA Terpenoid BAHD medium borderline BAHD__00044__sp_Q56WD9_THIK2_ARATH
PITA_000025063-RA Terpenoid BAHD low borderline BAHD__00087__sp_Q9M3B1_WSD6_ARATH
PITA_000025079-RA Terpenoid BAHD medium borderline BAHD__00044__sp_Q56WD9_THIK2_ARATH
PITA_000025120-RA Terpenoid BAHD medium pass BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
PITA_000025182-RA Terpenoid BAHD medium pass BAHD__00074__sp_Q9FFQ7_FACT_ARATH
PITA_000025228-RA Terpenoid BAHD low borderline BAHD__00047__sp_Q5KS41_WSD11_ARATH
PITA_000025302-RA Terpenoid BAHD medium pass BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
PITA_000025346-RA Terpenoid BAHD low borderline BAHD__00026__sp_O64811_SCP9_ARATH
PITA_000025438-RA Terpenoid BAHD medium pass BAHD__00047__sp_Q5KS41_WSD11_ARATH
PITA_000025525-RA Terpenoid BAHD low borderline BAHD__00087__sp_Q9M3B1_WSD6_ARATH
PITA_000025786-RA Terpenoid BAHD low borderline BAHD__00055__sp_Q8H780_SCP13_ARATH
PITA_000025947-RA Terpenoid BAHD low borderline BAHD__00016__sp_D4NUX0_HCT1_ACTRA
PITA_000025948-RA Terpenoid BAHD medium pass BAHD__00016__sp_D4NUX0_HCT1_ACTRA
PITA_000026379-RA Terpenoid BAHD medium pass BAHD__00016__sp_D4NUX0_HCT1_ACTRA
PITA_000026380-RA Terpenoid BAHD medium pass BAHD__00016__sp_D4NUX0_HCT1_ACTRA
PITA_000026467-RA Terpenoid BAHD medium pass BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
PITA_000026773-RA Terpenoid BAHD low borderline BAHD__00055__sp_Q8H780_SCP13_ARATH
PITA_000026994-RA Terpenoid BAHD medium pass BAHD__00030__sp_O80816_GLC_ARATH
PITA_000027010-RA Terpenoid BAHD low borderline BAHD__00021__sp_K7K424_DAT2D_SOYBN
PITA_000027762-RA Terpenoid BAHD low borderline BAHD__00009__sp_A0A4P1QUJ3_TTHAT_LUPAN
PITA_000027773-RA Terpenoid BAHD medium pass BAHD__00068__sp_Q9C533_ZDHC1_ARATH
PITA_000028233-RA Terpenoid BAHD low borderline BAHD__00055__sp_Q8H780_SCP13_ARATH
PITA_000028396-RA Terpenoid BAHD low borderline BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
PITA_000028397-RA Terpenoid BAHD medium pass BAHD__00001__sp_A0A068BGA5_AT1_ACTDE
PITA_000028398-RA Terpenoid BAHD medium pass BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA