PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

5262
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Gene Pathway Family Confidence Status
PITA_000028423-RA Terpenoid BAHD low borderline
PITA_000029191-RA Terpenoid BAHD medium pass
PITA_000029369-RA Terpenoid BAHD low borderline
PITA_000029370-RA Terpenoid BAHD medium pass
PITA_000029371-RA Terpenoid BAHD medium pass
PITA_000029572-RA Terpenoid BAHD low borderline
PITA_000029719-RA Terpenoid BAHD medium pass
PITA_000030310-RA Terpenoid BAHD medium pass
PITA_000030323-RA Terpenoid BAHD medium pass
PITA_000030345-RA Terpenoid BAHD low borderline
PITA_000030389-RA Terpenoid BAHD medium pass
PITA_000030487-RA Terpenoid BAHD medium pass
PITA_000030873-RA Terpenoid BAHD medium pass
PITA_000030936-RA Terpenoid BAHD medium pass
PITA_000031066-RA Terpenoid BAHD medium pass
PITA_000031157-RA Terpenoid BAHD low borderline
PITA_000031186-RA Terpenoid BAHD medium pass
PITA_000031299-RA Terpenoid BAHD medium pass
PITA_000031611-RA Terpenoid BAHD medium pass
PITA_000031627-RA Terpenoid BAHD low borderline
PITA_000031684-RA Terpenoid BAHD low borderline
PITA_000031817-RA Terpenoid BAHD medium pass
PITA_000032042-RA Terpenoid BAHD medium pass
PITA_000032141-RA Terpenoid BAHD medium pass
PITA_000032211-RA Terpenoid BAHD low borderline
PITA_000032510-RA Terpenoid BAHD medium pass
PITA_000032594-RA Terpenoid BAHD medium pass
PITA_000032765-RA Terpenoid BAHD low borderline
PITA_000032898-RA Terpenoid BAHD medium pass
PITA_000032967-RA Terpenoid BAHD low borderline
PITA_000033073-RA Terpenoid BAHD medium pass
PITA_000033221-RA Terpenoid BAHD medium pass
PITA_000033375-RA Terpenoid BAHD medium pass
PITA_000034071-RA Terpenoid BAHD medium pass
PITA_000034489-RA Terpenoid BAHD low borderline
PITA_000034775-RA Terpenoid BAHD medium pass
PITA_000034840-RA Terpenoid BAHD medium pass
PITA_000035028-RA Terpenoid BAHD medium pass
PITA_000035029-RA Terpenoid BAHD low borderline
PITA_000035625-RA Terpenoid BAHD low borderline
PITA_000036355-RA Terpenoid BAHD medium pass
PITA_000036450-RA Terpenoid BAHD medium pass
PITA_000036496-RA Terpenoid BAHD medium pass
PITA_000036617-RA Terpenoid BAHD medium pass
PITA_000036779-RA Terpenoid BAHD low borderline
PITA_000036925-RA Terpenoid BAHD medium borderline
PITA_000037502-RA Terpenoid BAHD low borderline
PITA_000037553-RA Terpenoid BAHD low borderline
PITA_000037554-RA Terpenoid BAHD medium pass
PITA_000037786-RA Terpenoid BAHD medium pass