PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

5262
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Gene Pathway Family Confidence Status Best Target
PITA_000037947-RA Terpenoid BAHD medium pass BAHD__00047__sp_Q5KS41_WSD11_ARATH
PITA_000037965-RA Terpenoid BAHD medium pass BAHD__00073__sp_Q9FF86_DCR_ARATH
PITA_000037983-RA Terpenoid BAHD medium pass BAHD__00012__sp_A1XWY7_CFAT_PETHY
PITA_000037984-RA Terpenoid BAHD medium pass BAHD__00012__sp_A1XWY7_CFAT_PETHY
PITA_000038829-RA Terpenoid BAHD medium pass BAHD__00023__sp_O22975_LPAAT_ARATH
PITA_000038868-RA Terpenoid BAHD medium pass BAHD__00016__sp_D4NUX0_HCT1_ACTRA
PITA_000038915-RA Terpenoid BAHD low borderline BAHD__00025__sp_O64810_SCP10_ARATH
PITA_000039466-RA Terpenoid BAHD medium pass BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
PITA_000039566-RA Terpenoid BAHD medium pass BAHD__00077__sp_Q9FNA9_PDAT1_ARATH
PITA_000039920-RA Terpenoid BAHD medium pass BAHD__00022__sp_K7PEY4_RAM2_MEDTR
PITA_000040182-RA Terpenoid BAHD low borderline BAHD__00009__sp_A0A4P1QUJ3_TTHAT_LUPAN
PITA_000040234-RA Terpenoid BAHD medium pass BAHD__00043__sp_Q52T38_ZDH22_ARATH
PITA_000040245-RA Terpenoid BAHD low borderline BAHD__00068__sp_Q9C533_ZDHC1_ARATH
PITA_000040254-RA Terpenoid BAHD medium pass BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
PITA_000040279-RA Terpenoid BAHD medium pass BAHD__00067__sp_Q9ASU1_DGAT2_ARATH
PITA_000040660-RA Terpenoid BAHD medium pass BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH
PITA_000040922-RA Terpenoid BAHD medium pass BAHD__00030__sp_O80816_GLC_ARATH
PITA_000040923-RA Terpenoid BAHD medium pass BAHD__00095__sp_Q9SZ58_BRAT1_ARATH
PITA_000040966-RA Terpenoid BAHD medium pass BAHD__00011__sp_A1A442_DGAT2_RICCO
PITA_000041079-RA Terpenoid BAHD medium pass BAHD__00074__sp_Q9FFQ7_FACT_ARATH
PITA_000041563-RA Terpenoid BAHD medium pass BAHD__00044__sp_Q56WD9_THIK2_ARATH
PITA_000041599-RA Terpenoid BAHD medium pass BAHD__00025__sp_O64810_SCP10_ARATH
PITA_000041637-RA Terpenoid BAHD low borderline BAHD__00026__sp_O64811_SCP9_ARATH
PITA_000041717-RA Terpenoid BAHD medium pass BAHD__00028__sp_O80467_SDT_ARATH
PITA_000041718-RA Terpenoid BAHD medium pass BAHD__00074__sp_Q9FFQ7_FACT_ARATH
PITA_000041719-RA Terpenoid BAHD low borderline BAHD__00009__sp_A0A4P1QUJ3_TTHAT_LUPAN
PITA_000041735-RA Terpenoid BAHD low borderline BAHD__00028__sp_O80467_SDT_ARATH
PITA_000041882-RA Terpenoid BAHD medium pass BAHD__00097__sp_Q9ZV87_NAPES_ARATH
PITA_000042154-RA Terpenoid BAHD medium borderline BAHD__00044__sp_Q56WD9_THIK2_ARATH
PITA_000042294-RA Terpenoid BAHD medium pass BAHD__00021__sp_K7K424_DAT2D_SOYBN
PITA_000042497-RA Terpenoid BAHD medium pass BAHD__00021__sp_K7K424_DAT2D_SOYBN
PITA_000042797-RA Terpenoid BAHD medium pass BAHD__00030__sp_O80816_GLC_ARATH
PITA_000043228-RA Terpenoid BAHD low borderline BAHD__00074__sp_Q9FFQ7_FACT_ARATH
PITA_000043229-RA Terpenoid BAHD medium pass BAHD__00074__sp_Q9FFQ7_FACT_ARATH
PITA_000043408-RA Terpenoid BAHD medium pass BAHD__00025__sp_O64810_SCP10_ARATH
PITA_000043662-RA Terpenoid BAHD medium pass BAHD__00021__sp_K7K424_DAT2D_SOYBN
PITA_000043973-RA Terpenoid BAHD medium pass BAHD__00009__sp_A0A4P1QUJ3_TTHAT_LUPAN
PITA_000044045-RA Terpenoid BAHD medium pass BAHD__00073__sp_Q9FF86_DCR_ARATH
PITA_000044062-RA Terpenoid BAHD low borderline BAHD__00087__sp_Q9M3B1_WSD6_ARATH
PITA_000044091-RA Terpenoid BAHD low borderline BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
PITA_000044163-RA Terpenoid BAHD low borderline BAHD__00028__sp_O80467_SDT_ARATH
PITA_000044424-RA Terpenoid BAHD medium pass BAHD__00027__sp_O80437_GPAT6_ARATH
PITA_000044857-RA Terpenoid BAHD medium pass BAHD__00030__sp_O80816_GLC_ARATH
PITA_000044888-RA Terpenoid BAHD low borderline BAHD__00002__sp_A0A068BIF1_AT9_ACTER
PITA_000045012-RA Terpenoid BAHD medium pass BAHD__00047__sp_Q5KS41_WSD11_ARATH
PITA_000045042-RA Terpenoid BAHD medium pass BAHD__00074__sp_Q9FFQ7_FACT_ARATH
PITA_000045103-RA Terpenoid BAHD medium pass BAHD__00025__sp_O64810_SCP10_ARATH
PITA_000045401-RA Terpenoid BAHD medium pass BAHD__00025__sp_O64810_SCP10_ARATH
PITA_000045598-RA Terpenoid BAHD low borderline BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
PITA_000045603-RA Terpenoid BAHD medium pass BAHD__00073__sp_Q9FF86_DCR_ARATH