PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

5262
Family-Level Assignments
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Family-Level Assignments Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Family-level assignments Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Gene Pathway Family Confidence Status Best Target
PITA_000046634-RA Terpenoid BAHD low borderline BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
PITA_000046769-RA Terpenoid BAHD low borderline BAHD__00055__sp_Q8H780_SCP13_ARATH
PITA_000047128-RA Terpenoid BAHD medium pass BAHD__00025__sp_O64810_SCP10_ARATH
PITA_000047171-RA Terpenoid BAHD medium pass BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
PITA_000047313-RA Terpenoid BAHD medium pass BAHD__00001__sp_A0A068BGA5_AT1_ACTDE
PITA_000047315-RA Terpenoid BAHD low borderline BAHD__00001__sp_A0A068BGA5_AT1_ACTDE
PITA_000047399-RA Terpenoid BAHD low borderline BAHD__00030__sp_O80816_GLC_ARATH
PITA_000048844-RA Terpenoid BAHD medium pass BAHD__00030__sp_O80816_GLC_ARATH
PITA_000048983-RA Terpenoid BAHD low borderline BAHD__00055__sp_Q8H780_SCP13_ARATH
PITA_000049217-RA Terpenoid BAHD medium pass BAHD__00062__sp_Q93V61_LCAT3_ARATH
PITA_000049748-RA Terpenoid BAHD medium pass BAHD__00026__sp_O64811_SCP9_ARATH
PITA_000050389-RA Terpenoid BAHD medium pass BAHD__00068__sp_Q9C533_ZDHC1_ARATH
PITA_000050772-RA Terpenoid BAHD medium pass BAHD__00073__sp_Q9FF86_DCR_ARATH
PITA_000050887-RA Terpenoid BAHD low borderline BAHD__00055__sp_Q8H780_SCP13_ARATH
PITA_000050907-RA Terpenoid BAHD medium pass BAHD__00040__sp_Q41745_LPAT_MAIZE
PITA_000051190-RA Terpenoid BAHD medium pass BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
PITA_000051610-RA Terpenoid BAHD medium pass BAHD__00027__sp_O80437_GPAT6_ARATH
PITA_000051831-RA Terpenoid BAHD medium pass BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
PITA_000051832-RA Terpenoid BAHD medium pass BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
PITA_000052643-RA Terpenoid BAHD low borderline BAHD__00016__sp_D4NUX0_HCT1_ACTRA
PITA_000052648-RA Terpenoid BAHD medium pass BAHD__00087__sp_Q9M3B1_WSD6_ARATH
PITA_000052746-RA Terpenoid BAHD medium borderline BAHD__00044__sp_Q56WD9_THIK2_ARATH
PITA_000053530-RA Terpenoid BAHD medium pass BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH
PITA_000053563-RA Terpenoid BAHD medium pass BAHD__00047__sp_Q5KS41_WSD11_ARATH
PITA_000053711-RA Terpenoid BAHD medium pass BAHD__00095__sp_Q9SZ58_BRAT1_ARATH
PITA_000053721-RA Terpenoid BAHD medium pass BAHD__00089__sp_Q9SB58_ZDH19_ARATH
PITA_000053768-RA Terpenoid BAHD medium pass BAHD__00073__sp_Q9FF86_DCR_ARATH
PITA_000053918-RA Terpenoid BAHD low borderline BAHD__00009__sp_A0A4P1QUJ3_TTHAT_LUPAN
PITA_000053979-RA Terpenoid BAHD low borderline BAHD__00027__sp_O80437_GPAT6_ARATH
PITA_000054013-RA Terpenoid BAHD medium pass BAHD__00073__sp_Q9FF86_DCR_ARATH
PITA_000054209-RA Terpenoid BAHD low borderline BAHD__00016__sp_D4NUX0_HCT1_ACTRA
PITA_000054620-RA Terpenoid BAHD medium pass BAHD__00027__sp_O80437_GPAT6_ARATH
PITA_000054642-RA Terpenoid BAHD medium pass BAHD__00044__sp_Q56WD9_THIK2_ARATH
PITA_000054665-RA Terpenoid BAHD medium pass BAHD__00001__sp_A0A068BGA5_AT1_ACTDE
PITA_000054744-RA Terpenoid BAHD medium pass BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
PITA_000054774-RA Terpenoid BAHD low borderline BAHD__00064__sp_Q93ZR6_WSD1_ARATH
PITA_000054846-RA Terpenoid BAHD medium pass BAHD__00047__sp_Q5KS41_WSD11_ARATH
PITA_000054908-RA Terpenoid BAHD medium pass BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
PITA_000054909-RA Terpenoid BAHD medium pass BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
PITA_000054954-RA Terpenoid BAHD low borderline BAHD__00096__sp_Q9XGY6_WAXS1_SIMCH
PITA_000055108-RA Terpenoid BAHD low borderline BAHD__00023__sp_O22975_LPAAT_ARATH
PITA_000055287-RA Terpenoid BAHD medium pass BAHD__00087__sp_Q9M3B1_WSD6_ARATH
PITA_000055315-RA Terpenoid BAHD low borderline BAHD__00009__sp_A0A4P1QUJ3_TTHAT_LUPAN
PITA_000055409-RA Terpenoid BAHD medium pass BAHD__00074__sp_Q9FFQ7_FACT_ARATH
PITA_000055435-RA Terpenoid BAHD low borderline BAHD__00025__sp_O64810_SCP10_ARATH
PITA_000055457-RA Terpenoid BAHD medium pass BAHD__00001__sp_A0A068BGA5_AT1_ACTDE
PITA_000055703-RA Terpenoid BAHD medium pass BAHD__00064__sp_Q93ZR6_WSD1_ARATH
PITA_000055704-RA Terpenoid BAHD low borderline BAHD__00087__sp_Q9M3B1_WSD6_ARATH
PITA_000055751-RA Terpenoid BAHD low borderline BAHD__00025__sp_O64810_SCP10_ARATH
PITA_000055759-RA Terpenoid BAHD medium pass BAHD__00025__sp_O64810_SCP10_ARATH